RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 ERVFRD-1P60508 538 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 PIGYQ3MUY2 71 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 UBE2UQ5VVX9 321 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 Q6P435 159 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 C9orf139Q6ZV77 190 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 BCL6BQ8N143 479 aaPredicted RBP11.3□□□□□ -0.6
USF1-205ENST00000473969 Q8NFD4 153 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 MRPS24Q96EL2 167 aaKnown RBP11.3□□□□□ -0.6
USF1-205ENST00000473969 ZNF714Q96N38 554 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 BARHL1Q9BZE3 327 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 CST11Q9H112 138 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 VCX3AQ9NNX9 186 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 ING3Q9NXR8 418 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 SF3B6Q9Y3B4 125 aaKnown RBP11.3□□□□□ -0.6
USF1-205ENST00000473969 FAM96BQ9Y3D0 163 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 FBN3Q75N90 2809 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 TRGV10A0A0A0MS01 117 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 RNF212BA8MTL3 300 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 H3BUI4 141 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 TRIM77I1YAP6 450 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 SLC33A1O00400 549 aaPredicted RBP11.29□□□□□ -0.6
USF1-205ENST00000473969 HSPB6O14558 160 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 PDCD5O14737 125 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 CRTAPO75718 401 aaPredicted RBP11.29□□□□□ -0.6
USF1-205ENST00000473969 TNFAIP8O95379 198 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 UBBP0CG47 229 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 ZNF728P0DKX0 622 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 MYL9P24844 172 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 CALRP27797 417 aaKnown RBP11.29□□□□□ -0.6
USF1-205ENST00000473969 PSMD7P51665 324 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 P2RX3P56373 397 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 RBM11P57052 281 aaKnown RBP11.29□□□□□ -0.6
USF1-205ENST00000473969 HILS1P60008 231 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 FABP5Q01469 135 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 AESQ08117 197 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 BAMBIQ13145 260 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 ZNF273Q14593 569 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 MPV17LQ2QL34 196 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 NHLRC3Q5JS37 347 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 KRBOX4Q5JUW0 171 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 ATAD3CQ5T2N8 411 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 RUSC1-AS1Q66K80 236 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 METAP1DQ6UB28 335 aaPredicted RBP11.29□□□□□ -0.6
USF1-205ENST00000473969 TMEM91Q6ZNR0 172 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 Q8N7P7 452 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 SIGLECL1Q8N7X8 197 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 UNKLQ9H9P5 680 aaKnown RBP11.29□□□□□ -0.6
USF1-205ENST00000473969 PLGRKTQ9HBL7 147 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 NDUFB11Q9NX14 153 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 LINC00312Q9Y6C7 94 aa11.29□□□□□ -0.6
USF1-205ENST00000473969 GEMIN2O14893 280 aaKnown RBP11.28□□□□□ -0.6
USF1-205ENST00000473969 CSN2P05814 226 aa11.28□□□□□ -0.6
USF1-205ENST00000473969 CCL3L1P16619 93 aa11.28□□□□□ -0.6
USF1-205ENST00000473969 KCNJ3P48549 501 aa11.28□□□□□ -0.6
USF1-205ENST00000473969 UBE2E1P51965 193 aa11.28□□□□□ -0.6
USF1-205ENST00000473969 ATXN7L3Q14CW9 347 aaPredicted RBP11.28□□□□□ -0.6
USF1-205ENST00000473969 SSX1Q16384 188 aa11.28□□□□□ -0.6
USF1-205ENST00000473969 LRRTM1Q86UE6 522 aa11.28□□□□□ -0.6
USF1-205ENST00000473969 TPRX1Q8N7U7 411 aa11.28□□□□□ -0.6
USF1-205ENST00000473969 OR4D6Q8NGJ1 314 aa11.28□□□□□ -0.6
USF1-205ENST00000473969 NEK7Q8TDX7 302 aa11.28□□□□□ -0.6
USF1-205ENST00000473969 SELENOIQ9C0D9 397 aa11.28□□□□□ -0.6
USF1-205ENST00000473969 GAL3ST2Q9H3Q3 398 aa11.28□□□□□ -0.6
USF1-205ENST00000473969 SPACA1Q9HBV2 294 aa11.28□□□□□ -0.6
USF1-205ENST00000473969 UBE2J1Q9Y385 318 aaPredicted RBP11.28□□□□□ -0.6
USF1-205ENST00000473969 A0A087WXM4 84 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 A0A1W2PRD5 423 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 A0A1W2PRF3 423 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 A0A1W2PRM7 423 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 MEX3AA1L020 520 aaKnown RBP11.27□□□□□ -0.61
USF1-205ENST00000473969 C17orf98A8MV24 154 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 RNASEK-C17orf49H0YIS7 233 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 NPFFO15130 113 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 VENTXO95231 258 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 PAHP00439 452 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 RBP4P02753 201 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 MGMTP16455 207 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 GALP22466 123 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 HTR2CP28335 458 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 GP2P55259 537 aaKnown RBP11.27□□□□□ -0.61
USF1-205ENST00000473969 LGALS4P56470 323 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 KLRD1Q13241 179 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 RBM39Q14498 530 aaKnown RBP11.27□□□□□ -0.61
USF1-205ENST00000473969 TAF9Q16594 264 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 DEFB112Q30KQ8 113 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 C1orf100Q5SVJ3 147 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 ZNF565Q8N9K5 539 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 SUMF2Q8NBJ7 301 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 OR6M1Q8NGM8 313 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 OR13D1Q8NGV5 346 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 DPCDQ9BVM2 203 aaPredicted RBP11.27□□□□□ -0.61
USF1-205ENST00000473969 PPIL3Q9H2H8 161 aaKnown RBP11.27□□□□□ -0.61
USF1-205ENST00000473969 BANF2Q9H503 90 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 OR6C3Q9NZP0 311 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 SSR3Q9UNL2 185 aa11.27□□□□□ -0.61
USF1-205ENST00000473969 AK6Q9Y3D8 172 aaKnown RBP11.27□□□□□ -0.61
USF1-205ENST00000473969 SVEP1Q4LDE5 3571 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 MEIKINA0A087WXM9 373 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 TRAV24A0A0B4J272 114 aa11.26□□□□□ -0.61
USF1-205ENST00000473969 TRDV1A0A1B0GX56 115 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms