RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 LIPKQ5VXJ0 399 aa15.44■□□□□ 0.06
PTCD3-210ENST00000473829 UNQ9370/PRO34162Q6UXP9 181 aa15.44■□□□□ 0.06
PTCD3-210ENST00000473829 LYPD6Q86Y78 171 aa15.44■□□□□ 0.06
PTCD3-210ENST00000473829 LDLRAD3Q86YD5 345 aa15.44■□□□□ 0.06
PTCD3-210ENST00000473829 MUL1Q969V5 352 aa15.44■□□□□ 0.06
PTCD3-210ENST00000473829 SLC25A28Q96A46 364 aa15.44■□□□□ 0.06
PTCD3-210ENST00000473829 COQ2Q96H96 371 aa15.44■□□□□ 0.06
PTCD3-210ENST00000473829 AJUBAQ96IF1 538 aa15.44■□□□□ 0.06
PTCD3-210ENST00000473829 IL36GQ9NZH8 169 aa15.44■□□□□ 0.06
PTCD3-210ENST00000473829 LINC00312Q9Y6C7 94 aa15.44■□□□□ 0.06
PTCD3-210ENST00000473829 TRAV24A0A0B4J272 114 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 A0A1W2PP11 408 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 hADV38S2A0JD32 116 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 MEIOCA2RUB1 952 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 TMEM89A2RUT3 159 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 HSPB6O14558 160 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 DEGS1O15121 323 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 SC5DO75845 299 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 IGHV4-59P01825 116 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 ERP29P30040 261 aaKnown RBP15.43■□□□□ 0.06
PTCD3-210ENST00000473829 GLIPR1P48060 266 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 AESQ08117 197 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 IL13RA2Q14627 380 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 ATXN7L3Q14CW9 347 aaPredicted RBP15.43■□□□□ 0.06
PTCD3-210ENST00000473829 JAGN1Q8N5M9 183 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 CHST4Q8NCG5 386 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 PPP1R35Q8TAP8 253 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 ZNF714Q96N38 554 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 CHIAQ9BZP6 476 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 METTL9Q9H1A3 318 aa15.43■□□□□ 0.06
PTCD3-210ENST00000473829 PPIL3Q9H2H8 161 aaKnown RBP15.43■□□□□ 0.06
PTCD3-210ENST00000473829 CSN2P05814 226 aa15.42■□□□□ 0.06
PTCD3-210ENST00000473829 HSMCR30P0CW71 290 aa15.42■□□□□ 0.06
PTCD3-210ENST00000473829 IGHV1-8P0DP01 117 aa15.42■□□□□ 0.06
PTCD3-210ENST00000473829 SERPINA2P20848 420 aa15.42■□□□□ 0.06
PTCD3-210ENST00000473829 MAPK3P27361 379 aaPredicted RBP15.42■□□□□ 0.06
PTCD3-210ENST00000473829 TPBGQ13641 420 aa15.42■□□□□ 0.06
PTCD3-210ENST00000473829 MS4A15Q8N5U1 240 aa15.42■□□□□ 0.06
PTCD3-210ENST00000473829 OR4D6Q8NGJ1 314 aa15.42■□□□□ 0.06
PTCD3-210ENST00000473829 UFD1Q92890 307 aa15.42■□□□□ 0.06
PTCD3-210ENST00000473829 TMEM203Q969S6 136 aa15.42■□□□□ 0.06
PTCD3-210ENST00000473829 ING3Q9NXR8 418 aa15.42■□□□□ 0.06
PTCD3-210ENST00000473829 ZNRD1Q9P1U0 126 aa15.42■□□□□ 0.06
PTCD3-210ENST00000473829 MRPS28Q9Y2Q9 187 aaKnown RBP15.42■□□□□ 0.06
PTCD3-210ENST00000473829 SF3B6Q9Y3B4 125 aaKnown RBP15.42■□□□□ 0.06
PTCD3-210ENST00000473829 FAM96BQ9Y3D0 163 aa15.42■□□□□ 0.06
PTCD3-210ENST00000473829 KIAA2026Q5HYC2 2103 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 MMP23AO75900 390 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 RBP4P02753 201 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 FBP1P09467 338 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 PAX6P26367 422 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 IER3P46695 156 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 RBM11P57052 281 aaKnown RBP15.41■□□□□ 0.06
PTCD3-210ENST00000473829 RPS25P62851 125 aaKnown RBP15.41■□□□□ 0.06
PTCD3-210ENST00000473829 MLLT11Q13015 90 aaPredicted RBP15.41■□□□□ 0.06
PTCD3-210ENST00000473829 GPR50Q13585 617 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 TBCEQ15813 527 aaPredicted RBP15.41■□□□□ 0.06
PTCD3-210ENST00000473829 SLC22A6Q4U2R8 563 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 NHLRC3Q5JS37 347 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 LRRTM1Q86UE6 522 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 OSR2Q8N2R0 312 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 SSMEM1Q8WWF3 244 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 THRSPQ92748 146 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 GCDHQ92947 438 aaPredicted RBP15.41■□□□□ 0.06
PTCD3-210ENST00000473829 HEXA-AS1Q9H8Q6 139 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 ISYNA1Q9NPH2 558 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 BLOC1S6Q9UL45 172 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 ST3GAL6Q9Y274 331 aa15.41■□□□□ 0.06
PTCD3-210ENST00000473829 hCG_1809904A0A1W2PP81 198 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 A0A1W2PPE2 198 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 A0A1W2PR64 198 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 A0A1W2PRV1 198 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 GEMIN2O14893 280 aaKnown RBP15.4■□□□□ 0.06
PTCD3-210ENST00000473829 DENRO43583 198 aaKnown RBP15.4■□□□□ 0.06
PTCD3-210ENST00000473829 HKR1P10072 659 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 CPEP16870 476 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 COMPP49747 757 aaPredicted RBP15.4■□□□□ 0.06
PTCD3-210ENST00000473829 TAF9Q16594 264 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 MIDNQ504T8 468 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 PAN3Q58A45 887 aaKnown RBP15.4■□□□□ 0.06
PTCD3-210ENST00000473829 KRBOX4Q5JUW0 171 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 C16orf87Q6PH81 154 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 GLIPR1L1Q6UWM5 242 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 BAIAP2L2Q6UXY1 529 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 TMEM91Q6ZNR0 172 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 CEACAM19Q7Z692 300 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 TRAPPC6BQ86SZ2 158 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 TMEM86BQ8N661 226 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 NKAIN3Q8N8D7 197 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 MGLLQ99685 303 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 UBE2J1Q9Y385 318 aaPredicted RBP15.4■□□□□ 0.06
PTCD3-210ENST00000473829 POMT1Q9Y6A1 747 aa15.4■□□□□ 0.06
PTCD3-210ENST00000473829 ODAMA1E959 279 aa15.39■□□□□ 0.05
PTCD3-210ENST00000473829 CLPXO76031 633 aa15.39■□□□□ 0.05
PTCD3-210ENST00000473829 CSTBP04080 98 aaKnown RBP15.39■□□□□ 0.05
PTCD3-210ENST00000473829 UCHL1P09936 223 aa15.39■□□□□ 0.05
PTCD3-210ENST00000473829 GDNFP39905 211 aa15.39■□□□□ 0.05
PTCD3-210ENST00000473829 LDLRAD2Q5SZI1 272 aa15.39■□□□□ 0.05
PTCD3-210ENST00000473829 AWAT2Q6E213 333 aa15.39■□□□□ 0.05
PTCD3-210ENST00000473829 LHFPL4Q7Z7J7 247 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms