RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 SPACA1Q9HBV2 294 aa7.58□□□□□ -1.2
SMG5-203ENST00000473643 HSF4Q9ULV5 492 aa7.58□□□□□ -1.2
SMG5-203ENST00000473643 MAB21L2Q9Y586 359 aa7.58□□□□□ -1.2
SMG5-203ENST00000473643 STAB1Q9NY15 2570 aa7.58□□□□□ -1.2
SMG5-203ENST00000473643 IGHV3OR15-7A0A075B7D8 119 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 TRAV24A0A0B4J272 114 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 SIGLEC5O15389 551 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 SOCS1O15524 211 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 ZNF737O75373 536 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 ZNF205O95201 554 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 OR2H2O95918 312 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 EIF4EP06730 217 aaKnown RBP7.57□□□□□ -1.2
SMG5-203ENST00000473643 FUT3P21217 361 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 CHATP28329 748 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 DUSP1P28562 367 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 TNFSF8P32971 234 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 MNDAP41218 407 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 VEGFCP49767 419 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 GMFBP60983 142 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 PAX5Q02548 391 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 ARL6IP1Q15041 203 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 ZNF561Q8N587 486 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 SPICQ8N5J4 248 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 C19orf18Q8NEA5 215 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 OR5T2Q8NGG2 359 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 OR10R2Q8NGX6 335 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 MED30Q96HR3 178 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 SOSTQ9BQB4 213 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 NICN1Q9BSH3 213 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 C6orf62Q9GZU0 229 aaPredicted RBP7.57□□□□□ -1.2
SMG5-203ENST00000473643 SHARPINQ9H0F6 387 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 FAM234AQ9H0X4 552 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 ATG5Q9H1Y0 275 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 ZNF665Q9H7R5 613 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMG5-203ENST00000473643 DIABLOQ9NR28 239 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 ADAM30Q9UKF2 790 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 CDC42EP3Q9UKI2 254 aa7.57□□□□□ -1.2
SMG5-203ENST00000473643 TMEM82A0PJX8 343 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 CEACAM18A8MTB9 384 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 F5H0A9 414 aaPredicted RBP7.56□□□□□ -1.2
SMG5-203ENST00000473643 K7N7A8 449 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 SLC33A1O00400 549 aaPredicted RBP7.56□□□□□ -1.2
SMG5-203ENST00000473643 RGS5O15539 181 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 XRCC3O43542 346 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 PDCD6O75340 191 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 CA11O75493 328 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 OR7C1O76099 320 aaPredicted RBP7.56□□□□□ -1.2
SMG5-203ENST00000473643 GYPAP02724 150 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 CSN2P05814 226 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 MELTFP08582 738 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 WNT2P09544 360 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 ZNF44P15621 663 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 GABRR1P24046 479 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 BLVRBP30043 206 aaPredicted RBP7.56□□□□□ -1.2
SMG5-203ENST00000473643 S100A5P33763 92 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 ETV6P41212 452 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 KCNJ3P48549 501 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 SNU13P55769 128 aaKnown RBP7.56□□□□□ -1.2
SMG5-203ENST00000473643 COL10A1Q03692 680 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 IKZF1Q13422 519 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 PDCD1Q15116 288 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 C11orf91Q3C1V1 193 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 MOGAT2Q3SYC2 334 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 CHRFAM7AQ494W8 412 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 PLAC9Q5JTB6 97 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 AVPI1Q5T686 147 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 METAP1DQ6UB28 335 aaPredicted RBP7.56□□□□□ -1.2
SMG5-203ENST00000473643 LYPD2Q6UXB3 125 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 C17orf107Q6ZR85 190 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 Q6ZTK2 550 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 SLC36A1Q7Z2H8 476 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 CCDC190Q86UF4 302 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 LAX1Q8IWV1 398 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 SUMF2Q8NBJ7 301 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 PPP1R35Q8TAP8 253 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 RAB3CQ96E17 227 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 SNX22Q96L94 193 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 GAFA1Q96PS6 74 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 NEDD4LQ96PU5 975 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 CCL13Q99616 98 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 MDFIQ99750 246 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 NCOR1P1Q9H4R4 102 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 PATZ1Q9HBE1 687 aaKnown RBP7.56□□□□□ -1.2
SMG5-203ENST00000473643 ZNF581Q9P0T4 197 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 RABL2AQ9UBK7 228 aaPredicted RBP7.56□□□□□ -1.2
SMG5-203ENST00000473643 MIOXQ9UGB7 285 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 OR14J1Q9UGF5 321 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 METRNQ9UJH8 293 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 RABL2BQ9UNT1 228 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 KCNK7Q9Y2U2 307 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 DYSFO75923 2080 aa7.56□□□□□ -1.2
SMG5-203ENST00000473643 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.56□□□□□ -1.23e-11■■■□□ 17.4
SMG5-203ENST00000473643 YLPM1P49750 1951 aaKnown RBP7.55□□□□□ -1.2
SMG5-203ENST00000473643 POM121CA8CG34 1229 aa7.55□□□□□ -1.2
SMG5-203ENST00000473643 SERPINE3A8MV23 424 aa7.55□□□□□ -1.2
SMG5-203ENST00000473643 MCRIP1C9JLW8 97 aa7.55□□□□□ -1.2
SMG5-203ENST00000473643 MFNGO00587 321 aa7.55□□□□□ -1.2
SMG5-203ENST00000473643 GPR37O15354 613 aa7.55□□□□□ -1.2
SMG5-203ENST00000473643 PSPNO60542 156 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms