RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 SCN3BQ9NY72 215 aa10.55□□□□□ -0.72
SHROOM3-204ENST00000473602 VPREB3Q9UKI3 123 aa10.55□□□□□ -0.72
SHROOM3-204ENST00000473602 A0A1W2PRD5 423 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 A0A1W2PRF3 423 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 A0A1W2PRM7 423 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 M0QZ24 198 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 SIRPB1O00241 398 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 GPR137BO60478 399 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 CDK1P06493 297 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 IGHV1-8P0DP01 117 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 CALCBP10092 127 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 ZNF44P15621 663 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 IGFBP3P17936 291 aaPredicted RBP10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 BDKRB2P30411 391 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 ZNF93P35789 620 aaPredicted RBP10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 HSPA13P48723 471 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 RAG2P55895 527 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 RPS11P62280 158 aaKnown RBP eCLIP10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 RIPK1Q13546 671 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 IL13RA2Q14627 380 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 AANATQ16613 207 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 DDI2Q5TDH0 399 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 OLFML2AQ68BL7 652 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 BRICD5Q6PL45 260 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 ASCL4Q6XD76 172 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 GDPGP1Q6ZNW5 385 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 TCF23Q7RTU1 214 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 SATL1Q86VE3 508 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 C1QL4Q86Z23 238 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 ZFP41Q8N8Y5 198 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 OR51T1Q8NGJ9 327 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 OR13D1Q8NGV5 346 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 MND1Q9BWT6 205 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 CDCA4Q9BXL8 241 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 ANKRD60Q9BZ19 345 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 TNFRSF19Q9NS68 423 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 PAK1IP1Q9NWT1 392 aaPredicted RBP10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 IL36GQ9NZH8 169 aa10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 UBE2J1Q9Y385 318 aaPredicted RBP10.54□□□□□ -0.72
SHROOM3-204ENST00000473602 TRGV10A0A0A0MS01 117 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 H0YHG0 523 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 DEGS1O15121 323 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 CLPXO76031 633 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 CELP19835 753 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 MYF6P23409 242 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 MAPK3P27361 379 aaPredicted RBP10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 PTGFRP43088 359 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 LGALS4P56470 323 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 RSU1Q15404 277 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 TAF9Q16594 264 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 NHLRC3Q5JS37 347 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 Q6P435 159 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 ZNF782Q6ZMW2 699 aaPredicted RBP10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 TRAPPC6BQ86SZ2 158 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 OR11H6Q8NGC7 330 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 OR13C5Q8NGS8 318 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 FAM192AQ9GZU8 254 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 MEGF9Q9H1U4 602 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 GAL3ST2Q9H3Q3 398 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 TAS2R3Q9NYW6 316 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 C1RLQ9NZP8 487 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 TPRKBQ9Y3C4 175 aa10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 TBL2Q9Y4P3 447 aaKnown RBP10.53□□□□□ -0.72
SHROOM3-204ENST00000473602 TRBV5-7A0A0A0MS05 114 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 CLPSL1A2RUU4 121 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 ODF3BA8MYP8 253 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 SLC33A1O00400 549 aaPredicted RBP10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 TIMM23O14925 209 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 ZNF780AO75290 641 aaPredicted RBP10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 COX7A1P24310 79 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 OR3A4PP47883 348 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 KCNJ3P48549 501 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 KRTAP10-3P60369 221 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 SLC35A2P78381 396 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 RELBQ01201 579 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 PAX5Q02548 391 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 SCN1BQ07699 218 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 LRRC75BQ2VPJ9 315 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 ZNF626Q68DY1 528 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 CDH26Q8IXH8 852 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 MS4A15Q8N5U1 240 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 TPRX1Q8N7U7 411 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 CORO2AQ92828 525 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 FOXRED1Q96CU9 486 aaPredicted RBP10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 OR14A2Q96R54 314 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 S100A13Q99584 98 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 ZNF184Q99676 751 aaPredicted RBP10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 METTL9Q9H1A3 318 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 PPA2Q9H2U2 334 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 NCOR1P1Q9H4R4 102 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 PCDHB16Q9NRJ7 776 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 FOXJ3Q9UPW0 622 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 SESN1Q9Y6P5 492 aa10.52□□□□□ -0.73
SHROOM3-204ENST00000473602 PNMA8CA0A1B0GUJ8 204 aa10.51□□□□□ -0.73
SHROOM3-204ENST00000473602 ODAMA1E959 279 aa10.51□□□□□ -0.73
SHROOM3-204ENST00000473602 FAM90A8PA6NJQ4 464 aa10.51□□□□□ -0.73
SHROOM3-204ENST00000473602 PTGES3LE9PB15 166 aa10.51□□□□□ -0.73
SHROOM3-204ENST00000473602 CSTBP04080 98 aaKnown RBP10.51□□□□□ -0.73
SHROOM3-204ENST00000473602 TGFBR2P37173 567 aa10.51□□□□□ -0.73
SHROOM3-204ENST00000473602 AESQ08117 197 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms