RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 HBG1P69891 147 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 HBG2P69892 147 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 NHLH2Q02577 135 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 PMS2P11Q13670 270 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 MPV17LQ2QL34 196 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 SP6Q3SY56 376 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 SPIN3Q5JUX0 258 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 MEX3BQ6ZN04 569 aaKnown RBP5.31□□□□□ -1.56
HERC4-209ENST00000473533 ETV3LQ6ZN32 361 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 C20orf196Q8IYI0 205 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 THAP3Q8WTV1 239 aaPredicted RBP5.31□□□□□ -1.56
HERC4-209ENST00000473533 GTF3AQ92664 365 aaKnown RBP5.31□□□□□ -1.56
HERC4-209ENST00000473533 PARP12Q9H0J9 701 aaKnown RBP5.31□□□□□ -1.56
HERC4-209ENST00000473533 EXPH5Q8NEV8 1989 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 SPTBN5Q9NRC6 3674 aaKnown RBP5.31□□□□□ -1.56
HERC4-209ENST00000473533 OR5H15A6NDH6 313 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 OR5H1A6NKK0 313 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 H0Y980 276 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 HSD17B6O14756 317 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 EFNA2O43921 213 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 CNOT4O95628 575 aaKnown RBP5.31□□□□□ -1.56
HERC4-209ENST00000473533 AADACP22760 399 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 UCP1P25874 307 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 GNRHRP30968 328 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 OPRM1P35372 400 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 PTGDSP41222 190 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 HAAOP46952 286 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 RND2P52198 227 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 SERF2P84101 59 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 ELOBQ15370 118 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 SHHQ15465 462 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 NRN1LQ496H8 165 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 TMEM123Q8N131 208 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 ZFP62Q8NB50 900 aaPredicted RBP5.31□□□□□ -1.56
HERC4-209ENST00000473533 OR10G3Q8NGC4 313 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 OR52M1Q8NGK5 317 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 OR5C1Q8NGR4 320 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 SLAMF9Q96A28 289 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 NABP1Q96AH0 204 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 FAM210BQ96KR6 192 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 SOX7Q9BT81 388 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 PARD6GQ9BYG4 376 aaPredicted RBP5.31□□□□□ -1.56
HERC4-209ENST00000473533 CLEC1BQ9P126 229 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 FREM2Q5SZK8 3169 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 IGKV1D-8A0A087WSZ0 117 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 LOC102723971A0A1B0GUV8 181 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 GEMIN2O14893 280 aaKnown RBP5.31□□□□□ -1.56
HERC4-209ENST00000473533 SCRG1O75711 98 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 WISP1O95388 367 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 DAOP14920 347 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 FGF7P21781 194 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 CRYGSP22914 178 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 RAC1P63000 192 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 NCMAPQ5T1S8 102 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 PLCXD3Q63HM9 321 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 TCEAL6Q6IPX3 200 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 SSX9Q7RTT3 188 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 RTN4RL2Q86UN3 420 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 OR10AD1Q8NGE0 317 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 NOL4LQ96MY1 436 aaPredicted RBP5.31□□□□□ -1.56
HERC4-209ENST00000473533 DUSP23Q9BVJ7 150 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 SH3BGRL3Q9H299 93 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 C11orf1Q9H5F2 150 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 WDR54Q9H977 334 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 MMP24Q9Y5R2 645 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 TRBV24-1A0A075B6N3 115 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 IGHV3-20A0A0C4DH32 117 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 FAM24AA6NFZ4 105 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 CYB5BO43169 146 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 SSSCA1O60232 199 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 OR2J2O76002 312 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 CD200P41217 278 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 ID3Q02535 119 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 ICAM4Q14773 271 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 COL19A1Q14993 1142 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 RIPPLY2Q5TAB7 128 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 OR2T2Q6IF00 324 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 RNF144BQ7Z419 303 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 REC114Q7Z4M0 266 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 WDFY1Q8IWB7 410 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 MKXQ8IYA7 352 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 SELENOHQ8IZQ5 122 aaKnown RBP5.3□□□□□ -1.56
HERC4-209ENST00000473533 CLDND2Q8NHS1 167 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 OR5B12Q96R08 314 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 RASL10BQ96S79 203 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 LRFN1Q9P244 771 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 FOXD3Q9UJU5 478 aaPredicted RBP5.3□□□□□ -1.56
HERC4-209ENST00000473533 IGSF23A1L1A6 192 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 NKX2-6A6NCS4 301 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 LINC01387J3KSC0 135 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 DVL1O14640 695 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 BCAT2O15382 392 aaPredicted RBP5.3□□□□□ -1.56
HERC4-209ENST00000473533 SYNGR3O43761 229 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 SOX15O60248 233 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 HAGHQ16775 308 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 RAET1LQ5VY80 246 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 SPSB3Q6PJ21 355 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 CRIP3Q6Q6R5 217 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 MRGPRGQ86SM5 289 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 TBC1D26Q86UD7 250 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms