RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 IL36RNQ9UBH0 155 aa10.82□□□□□ -0.68
CHD3-209ENST00000473376 OAZ3Q9UMX2 235 aa10.82□□□□□ -0.68
CHD3-209ENST00000473376 IGKV1-12A0A0C4DH73 117 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 DAPL1A0PJW8 107 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 FAM90A18PA6NE21 464 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 FAM90A16PA6NEW6 464 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 FAM90A20PA6NIJ5 464 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 OR4C45A6NMZ5 311 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 FAM90A9PA6NNJ1 464 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 FAM90A12PA8MX19 464 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 FAM90A5PA8MXJ8 464 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 DYNC1I1O14576 645 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 TOR1AO14656 332 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 MMP23AO75900 390 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 IGKV1D-12P01611 117 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 HTR1AP08908 422 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 FAM90A15PP0C7V4 464 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 FAM90A13PP0C7W8 464 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 FAM90A14PP0C7W9 464 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 FAM90A24PP0C7X0 464 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 OCM2P0CE71 109 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 OCMP0CE72 109 aaPredicted RBP10.81□□□□□ -0.68
CHD3-209ENST00000473376 FAM106CPP0CH98 169 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 CGB3P0DN86 165 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 CGB7P0DN87 165 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 PF4V1P10720 104 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 DUSP1P28562 367 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 PTGFRP43088 359 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 KCNJ3P48549 501 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 MTNR1BP49286 362 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 TP53I3Q53FA7 332 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 FOXB2Q5VYV0 432 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 Q6P435 159 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 SERPINA12Q8IW75 414 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 SYS1Q8N2H4 156 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 PARP16Q8N5Y8 322 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 Q8NFD4 153 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 PXT1Q8NFP0 134 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 OR10A7Q8NGE5 316 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 OR5D14Q8NGL3 314 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 OR9G1Q8NH87 305 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 SLC25A33Q9BSK2 321 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 ZCCHC4Q9H5U6 513 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 INPP5EQ9NRR6 644 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 EXOGQ9Y2C4 368 aaKnown RBP10.81□□□□□ -0.68
CHD3-209ENST00000473376 GSTK1Q9Y2Q3 226 aa10.81□□□□□ -0.68
CHD3-209ENST00000473376 AMMECR1Q9Y4X0 333 aaPredicted RBP10.81□□□□□ -0.68
CHD3-209ENST00000473376 KBTBD11-OT1A0A1B0GTJ5 212 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 TCRBV4S1A1TA0A5B7 111 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 APOL3O95236 402 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 AMY1AP04745 511 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 AMY2AP04746 511 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 ALPLP05186 524 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 GLIPR1P48060 266 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 NANOS3P60323 173 aaKnown RBP10.8□□□□□ -0.68
CHD3-209ENST00000473376 AESQ08117 197 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 ALKBH1Q13686 389 aaKnown RBP10.8□□□□□ -0.68
CHD3-209ENST00000473376 TCTEX1D4Q5JR98 221 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 TPTE2P1Q5T6R2 138 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 LYG1Q8N1E2 194 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 OSR2Q8N2R0 312 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 OR51T1Q8NGJ9 327 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 OR5M11Q96RB7 305 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 ORC6Q9Y5N6 252 aa10.8□□□□□ -0.68
CHD3-209ENST00000473376 TMEM212A6NML5 194 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 SIRPB1O00241 398 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 SLC33A1O00400 549 aaPredicted RBP10.79□□□□□ -0.68
CHD3-209ENST00000473376 DEGS1O15121 323 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 MPZL2O60487 215 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 INMTO95050 263 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 ZNF44P15621 663 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 C21orf33P30042 268 aaPredicted RBP10.79□□□□□ -0.68
CHD3-209ENST00000473376 ZP1P60852 638 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 EGFEM1PQ0D2K5 195 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 GALEQ14376 348 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 KISS1Q15726 138 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 KRBOX4Q5JUW0 171 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 PRAMEF5Q5TYX0 476 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 COMMD1Q8N668 190 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 OR13C3Q8NGS6 347 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 MYDGFQ969H8 173 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 RNFT2Q96EX2 444 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 PELI1Q96FA3 418 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 BARHL1Q9BZE3 327 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 ZMAT5Q9UDW3 170 aaKnown RBP10.79□□□□□ -0.68
CHD3-209ENST00000473376 MYRFQ9Y2G1 1151 aa10.79□□□□□ -0.68
CHD3-209ENST00000473376 MEX3AA1L020 520 aaKnown RBP10.78□□□□□ -0.68
CHD3-209ENST00000473376 NPIPB11E5RHQ5 1161 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 FGF16O43320 207 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 SULT1B1O43704 296 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 PF4P02776 101 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 LPLP06858 475 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 CCDC159P0C7I6 412 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 JUNBP17275 347 aaPredicted RBP10.78□□□□□ -0.68
CHD3-209ENST00000473376 RAB7AP51149 207 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 DCTN2Q13561 401 aaKnown RBP10.78□□□□□ -0.68
CHD3-209ENST00000473376 IL13RA2Q14627 380 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 CDK5R1Q15078 307 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 C17orf58Q2M2W7 97 aa10.78□□□□□ -0.68
CHD3-209ENST00000473376 ABCA11PQ4W5N1 156 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms