RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 FAM90A20PA6NIJ5 464 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 FAM90A9PA6NNJ1 464 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 FAM90A12PA8MX19 464 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 FAM90A5PA8MXJ8 464 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 PRODHO43272 600 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 PRKYO43930 277 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 MRPS14O60783 128 aaKnown RBP7.57□□□□□ -1.2
MCF2L-223ENST00000473345 HAND1O96004 215 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 IGKV1D-12P01611 117 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 FAM90A15PP0C7V4 464 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 FAM90A13PP0C7W8 464 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 FAM90A14PP0C7W9 464 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 FAM90A24PP0C7X0 464 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 SMIM18P0DKX4 95 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 GLIPR1P48060 266 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 SNU13P55769 128 aaKnown RBP7.57□□□□□ -1.2
MCF2L-223ENST00000473345 GABARAPL2P60520 117 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 BDH1Q02338 343 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 MEF2CQ06413 473 aaPredicted RBP7.57□□□□□ -1.2
MCF2L-223ENST00000473345 GRK1Q15835 563 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 C17orf58Q2M2W7 97 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 C9orf152Q5JTZ5 239 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 TPTE2P1Q5T6R2 138 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 AADACL4Q5VUY2 407 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 MEDAGQ5VYS4 303 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 GDPD3Q7L5L3 318 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 ZNF679Q8IYX0 411 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 TCEANCQ8N8B7 351 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 TMEM163Q8TC26 289 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 SNX22Q96L94 193 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 CEP19Q96LK0 163 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 TEX12Q9BXU0 123 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 PRRG3Q9BZD7 231 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 PKIBQ9C010 78 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 YIPF3Q9GZM5 350 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 MRPS18AQ9NVS2 196 aaKnown RBP7.57□□□□□ -1.2
MCF2L-223ENST00000473345 IMPAD1Q9NX62 359 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 TVP23BQ9NYZ1 205 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 DPM3Q9P2X0 92 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 AASSQ9UDR5 926 aa7.57□□□□□ -1.2
MCF2L-223ENST00000473345 MRM2Q9UI43 246 aaKnown RBP7.57□□□□□ -1.2
MCF2L-223ENST00000473345 DNAH1Q9P2D7 4330 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 LYSTQ99698 3801 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 BUB1B-PAK6H3BSN5 160 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 ENTPD6O75354 484 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 IGHV3-7P01780 117 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 ALDOBP05062 364 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 BCL3P20749 454 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 CCL1P22362 96 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 CDK2P24941 298 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 CD34P28906 385 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 OR3A4PP47883 348 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 DGCR2P98153 550 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 SNAPC1Q16533 368 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 SMN1Q16637 294 aaKnown RBP7.56□□□□□ -1.2
MCF2L-223ENST00000473345 ODF4Q2M2E3 257 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 HLA-DRB5Q30154 266 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 SLC35D3Q5M8T2 416 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 DEGS2Q6QHC5 323 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 SLC25A26Q70HW3 274 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 C16orf82Q7Z2V1 217 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 C5orf56Q8N8D9 126 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 KLHL30-AS1Q8NEE0 82 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 COQ2Q96H96 371 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 Q96MT0 163 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 PAK1IP1Q9NWT1 392 aaPredicted RBP7.56□□□□□ -1.2
MCF2L-223ENST00000473345 PSORS1C1Q9UIG5 152 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 OR52A1Q9UKL2 312 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 POLDIP2Q9Y2S7 368 aa7.56□□□□□ -1.2
MCF2L-223ENST00000473345 A0A1W2PPI3 338 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 hADV38S2A0JD32 116 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 LOC110117498-PIK3R3F6TDL0 507 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 C3orf84H3BNL1 204 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 SIRPB1O00241 398 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 RPLP1P05386 114 aaKnown RBP7.55□□□□□ -1.2
MCF2L-223ENST00000473345 TFAP2AP05549 437 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 HTR1AP08908 422 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 NHLRC4P0CG21 123 aaPredicted RBP7.55□□□□□ -1.2
MCF2L-223ENST00000473345 CGB3P0DN86 165 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 CGB7P0DN87 165 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 GABRR1P24046 479 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 P2RX3P56373 397 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 RPS7P62081 194 aaKnown RBP7.55□□□□□ -1.2
MCF2L-223ENST00000473345 AESQ08117 197 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 ASPHD1Q5U4P2 390 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 NXNL2Q5VZ03 156 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 FAM53AQ6NSI3 398 aaPredicted RBP7.55□□□□□ -1.2
MCF2L-223ENST00000473345 SBSPONQ8IVN8 264 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 BPIFB6Q8NFQ5 453 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 TSPAN14Q8NG11 270 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 MUC7Q8TAX7 377 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 EMG1Q92979 244 aaKnown RBP7.55□□□□□ -1.2
MCF2L-223ENST00000473345 LEAP2Q969E1 77 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 IL4I1Q96RQ9 567 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 PPIL3Q9H2H8 161 aaKnown RBP7.55□□□□□ -1.2
MCF2L-223ENST00000473345 ADGRL4Q9HBW9 690 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 CLN6Q9NWW5 311 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 CNOT2Q9NZN8 540 aaKnown RBP7.55□□□□□ -1.2
MCF2L-223ENST00000473345 IKZF2Q9UKS7 526 aa7.55□□□□□ -1.2
MCF2L-223ENST00000473345 BLOC1S6Q9UL45 172 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms