RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TMEM38BQ9NVV0 291 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 C3orf85A0A1B0GTC6 90 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 CDRT15L2A8MXV6 281 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 PDCD6O75340 191 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 PPYP01298 95 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 TCN2P20062 427 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 POLR2GP62487 172 aaKnown RBP eCLIP18.21■□□□□ 0.51
COL18A1-207ENST00000473212 TMEM42Q69YG0 159 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 ZFP62Q8NB50 900 aaPredicted RBP18.21■□□□□ 0.51
COL18A1-207ENST00000473212 SUMF2Q8NBJ7 301 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 PIGCQ92535 297 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 ZNF700Q9H0M5 742 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 CRIM1Q9NZV1 1036 aa18.21■□□□□ 0.51
COL18A1-207ENST00000473212 IGSF23A1L1A6 192 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 MPPED1O15442 326 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 CLN5O75503 358 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 CLDN15P56746 228 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 RPS23P62266 143 aaKnown RBP18.2■□□□□ 0.5
COL18A1-207ENST00000473212 TSC22D1Q15714 1073 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 CEACAM16Q2WEN9 425 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 GGNQ86UU5 652 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 LFNGQ8NES3 379 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 HS3ST6Q96QI5 342 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 WDR54Q9H977 334 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 KLK3P07288 261 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-207ENST00000473212 CST2P09228 141 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 ATP6V0CP27449 155 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 PLCXD3Q63HM9 321 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 OR14L1PQ8NHC6 308 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 NTNG2Q96CW9 530 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 ZNF845Q96IR2 970 aaPredicted RBP18.2■□□□□ 0.5
COL18A1-207ENST00000473212 ZDBF2Q9HCK1 2354 aa18.2■□□□□ 0.5
COL18A1-207ENST00000473212 PRRC2CQ9Y520 2896 aaKnown RBP18.19■□□□□ 0.5
COL18A1-207ENST00000473212 ZNF716A6NP11 495 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 AP4M1O00189 453 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 SLC33A1O00400 549 aaPredicted RBP18.19■□□□□ 0.5
COL18A1-207ENST00000473212 OR7C1O76099 320 aaPredicted RBP18.19■□□□□ 0.5
COL18A1-207ENST00000473212 OR2C1O95371 312 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 WIPI1Q5MNZ9 446 aaPredicted RBP18.19■□□□□ 0.5
COL18A1-207ENST00000473212 C9orf135Q5VTT2 229 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 AGBL5Q8NDL9 886 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 ABHD3Q8WU67 409 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 MALSU1Q96EH3 234 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 TCEAL7Q9BRU2 100 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 MAGT1Q9H0U3 335 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 WNT5BQ9H1J7 359 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 C11orf1Q9H5F2 150 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 SLC7A11Q9UPY5 501 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 OR6C6A6NF89 314 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 ZNF724A8MTY0 619 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 TRDCB7Z8K6 153 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 FUT6P51993 359 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 CLDN23Q96B33 292 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 MIOXQ9UGB7 285 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 DOCK10Q96BY6 2186 aa18.19■□□□□ 0.5
COL18A1-207ENST00000473212 NKX2-1P43699 371 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-207ENST00000473212 RBM11P57052 281 aaKnown RBP18.18■□□□□ 0.5
COL18A1-207ENST00000473212 CARD18P57730 90 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 MLF1P58340 268 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 RAB1AP62820 205 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 Q0VFX4 171 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 AAED1Q7RTV5 226 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 TMEM171Q8WVE6 324 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 TCTEX1D2Q8WW35 142 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 TRAV20A0A0B4J274 112 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 hCG_38984A0A1B0GV85 526 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 A0A1B0GW64 132 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 SSSCA1O60232 199 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 CBR3O75828 277 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 TRAPPC6AO75865 159 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 CCL2P13500 99 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 EDN3P14138 238 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 GNRHRP30968 328 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 CEBPGP53567 150 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 NCMAPQ5T1S8 102 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 TMEM211Q6ICI0 200 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 MAFAQ8NHW3 353 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-207ENST00000473212 TMEM222Q9H0R3 208 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 IL36GQ9NZH8 169 aa18.18■□□□□ 0.5
COL18A1-207ENST00000473212 UBE2J1Q9Y385 318 aaPredicted RBP18.18■□□□□ 0.5
COL18A1-207ENST00000473212 RBFOX3A6NFN3 312 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 CDS2O95674 445 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 FUT3P21217 361 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 RAC3P60763 192 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 ZNF266Q14584 549 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 SPIN3Q5JUX0 258 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 TBC1D26Q86UD7 250 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 SLC7A10Q9NS82 523 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 DEPPQ9NTK1 212 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 IL36RNQ9UBH0 155 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 SIT1Q9Y3P8 196 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 DNAJC13O75165 2243 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 EIF2S3P41091 472 aaKnown RBP18.17■□□□□ 0.5
COL18A1-207ENST00000473212 EXT1Q16394 746 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 SPSB3Q6PJ21 355 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 ZNF695Q8IW36 515 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 FOXB1Q99853 325 aa18.17■□□□□ 0.5
COL18A1-207ENST00000473212 CCDC163A0A0D9SF12 145 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 PINLYPA6NC86 204 aa18.16■□□□□ 0.5
COL18A1-207ENST00000473212 HSPB6O14558 160 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms