RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TMEM200BQ69YZ2 307 aa17.12■□□□□ 0.33
TOP3A-204ENST00000472959 GDPGP1Q6ZNW5 385 aa17.12■□□□□ 0.33
TOP3A-204ENST00000472959 OR4M1Q8NGD0 313 aa17.12■□□□□ 0.33
TOP3A-204ENST00000472959 POM121Q96HA1 1249 aa17.12■□□□□ 0.33
TOP3A-204ENST00000472959 NIPBLQ6KC79 2804 aaeCLIP17.11■□□□□ 0.33
TOP3A-204ENST00000472959 TRAV24A0A0B4J272 114 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A10PA6NDY2 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A18PA6NE21 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A16PA6NEW6 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A20PA6NIJ5 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A8PA6NJQ4 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A7PA6NKC0 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A22PA8MWA6 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A12PA8MX19 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A5PA8MXJ8 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A23PA8MXZ1 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 H3BUI4 141 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 GEMIN2O14893 280 aaKnown RBP17.11■□□□□ 0.33
TOP3A-204ENST00000472959 OR7C1O76099 320 aaPredicted RBP17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A15PP0C7V4 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A13PP0C7W8 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A14PP0C7W9 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 FAM90A24PP0C7X0 464 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 SMIM18P0DKX4 95 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 MGMTP16455 207 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 GADD45AP24522 165 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 KCNJ3P48549 501 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 EDDM3AQ14507 147 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 PDCD1Q15116 288 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 RAB11BQ15907 218 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 PAN3Q58A45 887 aaKnown RBP17.11■□□□□ 0.33
TOP3A-204ENST00000472959 TPRA1Q86W33 373 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 TMEM104Q8NE00 496 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 KCNG3Q8TAE7 436 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 SLC25A28Q96A46 364 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 KCTD7Q96MP8 289 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 CHCHD6Q9BRQ6 235 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 PCGF1Q9BSM1 259 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 SELENOIQ9C0D9 397 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 SPACA1Q9HBV2 294 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 NAV3Q8IVL0 2385 aa17.11■□□□□ 0.33
TOP3A-204ENST00000472959 hADV38S2A0JD32 116 aa17.1■□□□□ 0.33
TOP3A-204ENST00000472959 SHISA3A0PJX4 238 aa17.1■□□□□ 0.33
TOP3A-204ENST00000472959 RAB3BP20337 219 aa17.1■□□□□ 0.33
TOP3A-204ENST00000472959 CFPP27918 469 aa17.1■□□□□ 0.33
TOP3A-204ENST00000472959 P2RX3P56373 397 aa17.1■□□□□ 0.33
TOP3A-204ENST00000472959 TAF9Q16594 264 aa17.1■□□□□ 0.33
TOP3A-204ENST00000472959 YIPF6Q96EC8 236 aa17.1■□□□□ 0.33
TOP3A-204ENST00000472959 TBX15Q96SF7 602 aa17.1■□□□□ 0.33
TOP3A-204ENST00000472959 PPA2Q9H2U2 334 aa17.1■□□□□ 0.33
TOP3A-204ENST00000472959 BANF2Q9H503 90 aa17.1■□□□□ 0.33
TOP3A-204ENST00000472959 METTL8Q9H825 291 aaKnown RBP17.1■□□□□ 0.33
TOP3A-204ENST00000472959 NUP50Q9UKX7 468 aa17.1■□□□□ 0.33
TOP3A-204ENST00000472959 LOC100506127A0A0U1RQW1 187 aa17.09■□□□□ 0.33
TOP3A-204ENST00000472959 hCG_1809904A0A1W2PP81 198 aa17.09■□□□□ 0.33
TOP3A-204ENST00000472959 A0A1W2PPE2 198 aa17.09■□□□□ 0.33
TOP3A-204ENST00000472959 A0A1W2PR64 198 aa17.09■□□□□ 0.33
TOP3A-204ENST00000472959 A0A1W2PRV1 198 aa17.09■□□□□ 0.33
TOP3A-204ENST00000472959 VSIG8P0DPA2 414 aa17.09■□□□□ 0.33
TOP3A-204ENST00000472959 ARSBP15848 533 aa17.09■□□□□ 0.33
TOP3A-204ENST00000472959 BPIFB3P59826 476 aa17.09■□□□□ 0.33
TOP3A-204ENST00000472959 KLF17Q5JT82 389 aaPredicted RBP17.09■□□□□ 0.33
TOP3A-204ENST00000472959 OR2W3Q7Z3T1 314 aa17.09■□□□□ 0.33
TOP3A-204ENST00000472959 FAM46BQ96A09 425 aa17.09■□□□□ 0.33
TOP3A-204ENST00000472959 Q96M66 194 aa17.09■□□□□ 0.33
TOP3A-204ENST00000472959 DPCDQ9BVM2 203 aaPredicted RBP17.09■□□□□ 0.33
TOP3A-204ENST00000472959 MRPS26Q9BYN8 205 aaKnown RBP17.09■□□□□ 0.33
TOP3A-204ENST00000472959 IFITM5A6NNB3 132 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 TMEM14DPA8MWL7 114 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 IFNA2P01563 188 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 OR10A3P58181 314 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 QRFPP83859 136 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 PAX5Q02548 391 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 AESQ08117 197 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 P2RY14Q15391 338 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 VMO1Q7Z5L0 202 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 Q8N7P7 452 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 SUMF2Q8NBJ7 301 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 FAM3DQ96BQ1 224 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 BARHL1Q9BZE3 327 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 NCOR1P1Q9H4R4 102 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 UNKLQ9H9P5 680 aaKnown RBP17.08■□□□□ 0.32
TOP3A-204ENST00000472959 STEAP1Q9UHE8 339 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 LINC00312Q9Y6C7 94 aa17.08■□□□□ 0.32
TOP3A-204ENST00000472959 HSPB6O14558 160 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 AIREO43918 545 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 MPIG6BO95866 241 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 ZNF728P0DKX0 622 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 EPHA1P21709 976 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 PRTN3P24158 256 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 FPR2P25090 351 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 RPS27AP62979 156 aaKnown RBP17.07■□□□□ 0.32
TOP3A-204ENST00000472959 ZNF273Q14593 569 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 KRBOX4Q5JUW0 171 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 ATAD3CQ5T2N8 411 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 GPR157Q5UAW9 335 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 METAP1DQ6UB28 335 aaPredicted RBP17.07■□□□□ 0.32
TOP3A-204ENST00000472959 CENPOQ9BU64 300 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 TMEM59Q9BXS4 323 aa17.07■□□□□ 0.32
TOP3A-204ENST00000472959 RCC2Q9P258 522 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms