RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 BARHL1Q9BZE3 327 aa11.68□□□□□ -0.54
BRCA1-211ENST00000472490 CST11Q9H112 138 aa11.68□□□□□ -0.54
BRCA1-211ENST00000472490 SPACA1Q9HBV2 294 aa11.68□□□□□ -0.54
BRCA1-211ENST00000472490 ZNF69Q9UC07 566 aa11.68□□□□□ -0.54
BRCA1-211ENST00000472490 LINC00312Q9Y6C7 94 aa11.68□□□□□ -0.54
BRCA1-211ENST00000472490 TLN2Q9Y4G6 2542 aa11.68□□□□□ -0.54
BRCA1-211ENST00000472490 IGHV3OR16-10A0A075B7F0 116 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 IGHV1-69DA0A0B4J2H0 117 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 CENPVL3A0A0U1RRI6 287 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 OR7C1O76099 320 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-211ENST00000472490 IGHV1-69P01742 117 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 MYL9P24844 172 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 OR3A1P47881 315 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 P2RX3P56373 397 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 SSX1Q16384 188 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 PIGYQ3MUY2 71 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 PAN3Q58A45 887 aaKnown RBP11.67□□□□□ -0.54
BRCA1-211ENST00000472490 Q6P435 159 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 CD200R1LQ6Q8B3 271 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 LRRTM1Q86UE6 522 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 LYPD6Q86Y78 171 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 Q8N7P7 452 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 OR4S1Q8NGB4 309 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 OR4D6Q8NGJ1 314 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 C22orf15Q8WYQ4 148 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 TMEM158Q8WZ71 300 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 ZNF714Q96N38 554 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 NKX3-1Q99801 234 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-211ENST00000472490 SLC6A7Q99884 636 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 PPA2Q9H2U2 334 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 IFT22Q9H7X7 185 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 HEXA-AS1Q9H8Q6 139 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 SIRT7Q9NRC8 400 aa11.67□□□□□ -0.54
BRCA1-211ENST00000472490 UBE2J1Q9Y385 318 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-211ENST00000472490 SVEP1Q4LDE5 3571 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 A0A087WXM4 84 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 TRGV10A0A0A0MS01 117 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 TRDV1A0A1B0GX56 115 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 PDCD5O14737 125 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 CRTAPO75718 401 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-211ENST00000472490 ZNF728P0DKX0 622 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 HTR2CP28335 458 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 UBE2E1P51965 193 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 GP2P55259 537 aaKnown RBP11.66□□□□□ -0.54
BRCA1-211ENST00000472490 HILS1P60008 231 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 ERVFRD-1P60508 538 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 KRBOX4Q5JUW0 171 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 C1orf100Q5SVJ3 147 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 BRD3OSQ6XYD6 125 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 TRAPPC6BQ86SZ2 158 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 ZNF565Q8N9K5 539 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 OR6M1Q8NGM8 313 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 PPIL3Q9H2H8 161 aaKnown RBP11.66□□□□□ -0.54
BRCA1-211ENST00000472490 GAL3ST2Q9H3Q3 398 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 PLGRKTQ9HBL7 147 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 OR6C3Q9NZP0 311 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 ZFHX3Q15911 3703 aa11.66□□□□□ -0.54
BRCA1-211ENST00000472490 TRAV1-2A0A0B4J238 106 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A10PA6NDY2 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A18PA6NE21 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A16PA6NEW6 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A20PA6NIJ5 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A8PA6NJQ4 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A7PA6NKC0 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A22PA8MWA6 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A12PA8MX19 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A5PA8MXJ8 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A23PA8MXZ1 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 HSPB6O14558 160 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 GEMIN2O14893 280 aaKnown RBP11.65□□□□□ -0.54
BRCA1-211ENST00000472490 BPNT1O95861 308 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A15PP0C7V4 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A13PP0C7W8 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A14PP0C7W9 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM90A24PP0C7X0 464 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 MGMTP16455 207 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 AESQ08117 197 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 ZNF273Q14593 569 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 SYT6Q5T7P8 510 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-211ENST00000472490 TSPAN14Q8NG11 270 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 KCNG3Q8TAE7 436 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 ZFAND2BQ8WV99 257 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 NCOR1P1Q9H4R4 102 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 TAS2R3Q9NYW6 316 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 STUB1Q9UNE7 303 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 SSR3Q9UNL2 185 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 FAM96BQ9Y3D0 163 aa11.65□□□□□ -0.54
BRCA1-211ENST00000472490 SONP18583 2426 aaKnown RBP11.64□□□□□ -0.55
BRCA1-211ENST00000472490 TRAV24A0A0B4J272 114 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 C17orf98A8MV24 154 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 TRIM77I1YAP6 450 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 SLC22A1O15245 554 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 CD37P11049 281 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 CCL3L1P16619 93 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 FGF9P31371 208 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-211ENST00000472490 PAX5Q02548 391 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 RBM39Q14498 530 aaKnown RBP11.64□□□□□ -0.55
BRCA1-211ENST00000472490 ATXN7L3Q14CW9 347 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-211ENST00000472490 NEDD8Q15843 81 aa11.64□□□□□ -0.55
BRCA1-211ENST00000472490 TAF9Q16594 264 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms