RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TBL2Q9Y4P3 447 aaKnown RBP6.44□□□□□ -1.38
USP48-207ENST00000471752 DYNC2H1Q8NCM8 4307 aaKnown RBP6.44□□□□□ -1.38
USP48-207ENST00000471752 DNAH7Q8WXX0 4024 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 A0A1W2PP11 408 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 hCG_1809904A0A1W2PP81 198 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 A0A1W2PPE2 198 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 A0A1W2PPH5 198 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 A0A1W2PR64 198 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 A0A1W2PRV1 198 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 ODAMA1E959 279 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 F2RL2O00254 374 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 WBP4O75554 376 aaKnown RBP6.43□□□□□ -1.38
USP48-207ENST00000471752 CLIC3O95833 236 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 LALBAP00709 142 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 ISG15P05161 165 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 LPLP06858 475 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 UBCP0CG48 685 aaKnown RBP6.43□□□□□ -1.38
USP48-207ENST00000471752 LIMS3P0CW19 117 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 LIMS4P0CW20 117 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 DBTP11182 482 aaKnown RBP6.43□□□□□ -1.38
USP48-207ENST00000471752 ZNF20P17024 532 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 LMO1P25800 156 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 ERP29P30040 261 aaKnown RBP6.43□□□□□ -1.38
USP48-207ENST00000471752 OR3A4PP47883 348 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 SOX2P48431 317 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 ETV1P50549 477 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 ALDH3A2P51648 485 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 CCR9P51686 369 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 DYNLT3P51808 116 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 TMED1Q13445 227 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 KISS1Q15726 138 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 LTC4SQ16873 150 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 PIGYQ3MUY2 71 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 ABCA11PQ4W5N1 156 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 TRAPPC6BQ86SZ2 158 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 ACBD7Q8N6N7 88 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 OR52I1Q8NGK6 324 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 OR13C5Q8NGS8 318 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 RPS4Y2Q8TD47 263 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 TRUB1Q8WWH5 349 aaKnown RBP6.43□□□□□ -1.38
USP48-207ENST00000471752 PP6455Q8WZ26 134 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 CORO2AQ92828 525 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 FOXRED1Q96CU9 486 aaPredicted RBP6.43□□□□□ -1.38
USP48-207ENST00000471752 ALG8Q9BVK2 526 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 CLEC7AQ9BXN2 247 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 PRSS22Q9GZN4 317 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 COMMD4Q9H0A8 199 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 ZCCHC4Q9H5U6 513 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 SEBOXQ9HB31 216 aaPredicted RBP6.43□□□□□ -1.38
USP48-207ENST00000471752 EXOSC4Q9NPD3 245 aaKnown RBP6.43□□□□□ -1.38
USP48-207ENST00000471752 ABCB10Q9NRK6 738 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 AURKAIP1Q9NWT8 199 aaPredicted RBP6.43□□□□□ -1.38
USP48-207ENST00000471752 IMPAD1Q9NX62 359 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 ERVK13-1Q9NX77 482 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 CLEC2DQ9UHP7 191 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 LINC00527Q9UJ94 153 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 STAB2Q8WWQ8 2551 aa6.43□□□□□ -1.38
USP48-207ENST00000471752 MAGEA13PA6NCF6 341 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 BUB1B-PAK6H3BSN5 160 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 SH2D1BO14796 132 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 DEGS1O15121 323 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 CIB2O75838 187 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 CDRT1O95170 752 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 RBP4P02753 201 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 MT-ND2P03891 347 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 TMEM225BP0DP42 221 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 FCGR1AP12314 374 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 ZNF44P15621 663 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 PRKACBP22694 351 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 NFYBP25208 207 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 HTR1DP28221 377 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 VDAC2P45880 294 aaPredicted RBP6.42□□□□□ -1.38
USP48-207ENST00000471752 BDH1Q02338 343 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 GALEQ14376 348 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 RBM39Q14498 530 aaKnown RBP6.42□□□□□ -1.38
USP48-207ENST00000471752 HNF4GQ14541 408 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 KRBOX4Q5JUW0 171 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 MINOS1Q5TGZ0 78 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 OR2G6Q5TZ20 316 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 FOXB2Q5VYV0 432 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 ZNF529Q6P280 563 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 HEPN1Q6WQI6 88 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 LCNL1Q6ZST4 164 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 LHFPL2Q6ZUX7 228 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 FAM220AQ7Z4H9 259 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 ZNF329Q86UD4 541 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 SATL1Q86VE3 508 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 RFKQ969G6 155 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 MYDGFQ969H8 173 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 PHF21AQ96BD5 680 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 KIRREL1Q96J84 757 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 NOL4LQ96MY1 436 aaPredicted RBP6.42□□□□□ -1.38
USP48-207ENST00000471752 NEK6Q9HC98 313 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 RAB18Q9NP72 206 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 INPP5EQ9NRR6 644 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 FAM118AQ9NWS6 357 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 TAS2R4Q9NYW5 299 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 DPM3Q9P2X0 92 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 KIF25Q9UIL4 384 aa6.42□□□□□ -1.38
USP48-207ENST00000471752 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms