RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 PLXNB1O43157 2135 aa15.19■□□□□ 0.02
COMMD1-207ENST00000471704 IGHV2-26A0A0B4J1V2 119 aa15.18■□□□□ 0.02
COMMD1-207ENST00000471704 OGG1O15527 345 aa15.18■□□□□ 0.02
COMMD1-207ENST00000471704 RPSAP08865 295 aaKnown RBP15.18■□□□□ 0.02
COMMD1-207ENST00000471704 CSF1P09603 554 aa15.18■□□□□ 0.02
COMMD1-207ENST00000471704 TMEM225BP0DP42 221 aa15.18■□□□□ 0.02
COMMD1-207ENST00000471704 OGFRL1Q5TC84 451 aaPredicted RBP15.18■□□□□ 0.02
COMMD1-207ENST00000471704 TTC23Q5W5X9 447 aa15.18■□□□□ 0.02
COMMD1-207ENST00000471704 LIAT1Q6ZQX7 453 aa15.18■□□□□ 0.02
COMMD1-207ENST00000471704 GGHQ92820 318 aa15.18■□□□□ 0.02
COMMD1-207ENST00000471704 TMEM133Q9H2Q1 129 aa15.18■□□□□ 0.02
COMMD1-207ENST00000471704 GLS2Q9UI32 602 aa15.18■□□□□ 0.02
COMMD1-207ENST00000471704 UBE2J1Q9Y385 318 aaPredicted RBP15.18■□□□□ 0.02
COMMD1-207ENST00000471704 CASQ2O14958 399 aaPredicted RBP15.17■□□□□ 0.02
COMMD1-207ENST00000471704 CSN2P05814 226 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 ZNF44P15621 663 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 RAB3AP20336 220 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 SCN1BQ07699 218 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 SSX2Q16385 188 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 UTF1Q5T230 341 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 PRAMEF5Q5TYX0 476 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 ELP2Q6IA86 826 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 DHRSXQ8N5I4 330 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 GPR148Q8TDV2 347 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 CORO2AQ92828 525 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 MALSU1Q96EH3 234 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 PPIL3Q9H2H8 161 aaKnown RBP15.17■□□□□ 0.02
COMMD1-207ENST00000471704 C8orf4Q9NR00 106 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 BABAM2Q9NXR7 383 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 ZNF581Q9P0T4 197 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 FOXJ3Q9UPW0 622 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 EXOSC1Q9Y3B2 195 aaKnown RBP15.17■□□□□ 0.02
COMMD1-207ENST00000471704 NOTCH3Q9UM47 2321 aa15.17■□□□□ 0.02
COMMD1-207ENST00000471704 MTNR1BP49286 362 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 DYNC1I2Q13409 638 aaKnown RBP15.16■□□□□ 0.02
COMMD1-207ENST00000471704 ATXN7L3Q14CW9 347 aaPredicted RBP15.16■□□□□ 0.02
COMMD1-207ENST00000471704 FAM189A2Q15884 450 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 HIST2H2BDQ6DRA6 164 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 DMKNQ6E0U4 476 aaPredicted RBP15.16■□□□□ 0.02
COMMD1-207ENST00000471704 TMPRSS11AQ6ZMR5 421 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 Q6ZTK2 550 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 TRAPPC6BQ86SZ2 158 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 SETD9Q8NE22 299 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 PXT1Q8NFP0 134 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 OR4P4Q8NGL7 312 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 OR10K1Q8NGX5 313 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 OR2T6Q8NHC8 308 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 FBLIM1Q8WUP2 373 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 TMEM106AQ96A25 262 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 FOXRED1Q96CU9 486 aaPredicted RBP15.16■□□□□ 0.02
COMMD1-207ENST00000471704 SMIM19Q96E16 107 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 TMEM80Q96HE8 168 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 PGLYRP3Q96LB9 341 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 CDCA4Q9BXL8 241 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 NPFFR1Q9GZQ6 430 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 TCF19Q9Y242 345 aa15.16■□□□□ 0.02
COMMD1-207ENST00000471704 IRGMA1A4Y4 181 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 ODAMA1E959 279 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 A6NDX4 124 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 CAPGP40121 348 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 OR3A4PP47883 348 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 RPS11P62280 158 aaKnown RBP eCLIP15.15■□□□□ 0.02
COMMD1-207ENST00000471704 C17orf58Q2M2W7 97 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 ASCL4Q6XD76 172 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 SATL1Q86VE3 508 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 C1QL4Q86Z23 238 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 Q8N2B8 174 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 ZFP41Q8N8Y5 198 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 CHST4Q8NCG5 386 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 Q8NFD4 153 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 OR51T1Q8NGJ9 327 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 OR52N1Q8NH53 320 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 TNFAIP8L1Q8WVP5 186 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 CLEC7AQ9BXN2 247 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 ING3Q9NXR8 418 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 HILPDAQ9Y5L2 63 aa15.15■□□□□ 0.02
COMMD1-207ENST00000471704 TRAV24A0A0B4J272 114 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 TRBV5-5A0A0J9YX44 114 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 FAM172BPA6NC97 362 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 MAGEA13PA6NCF6 341 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 H0YJX3 145 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 HSPB6O14558 160 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 DEGS1O15121 323 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 XPNPEP2O43895 674 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 ALDOBP05062 364 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 IGFBP3P17936 291 aaPredicted RBP15.14■□□□□ 0.01
COMMD1-207ENST00000471704 MYL12AP19105 171 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 CDK2P24941 298 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 PIGYQ3MUY2 71 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 KRBOX4Q5JUW0 171 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 HEPN1Q6WQI6 88 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 TMEM219Q86XT9 240 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 KLHDC1Q8N7A1 406 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 DTX3Q8N9I9 347 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 NR1H4Q96RI1 486 aaPredicted RBP15.14■□□□□ 0.01
COMMD1-207ENST00000471704 ZNF702PQ9H963 129 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 ZNF286AQ9HBT8 521 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 TAS2R3Q9NYW6 316 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 ZNF281Q9Y2X9 895 aa15.14■□□□□ 0.01
COMMD1-207ENST00000471704 PCDHGB5Q9Y5G0 923 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms