RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 SIRPB1O00241 398 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 SH2D1BO14796 132 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 MRPS14O60783 128 aaKnown RBP10.13□□□□□ -0.79
LINC00888-202ENST00000471496 MAS1P04201 325 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 UCHL1P09936 223 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 HSMCR30P0CW71 290 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 CD37P11049 281 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 CCL3L1P16619 93 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 EEF1B2P24534 225 aaKnown RBP10.13□□□□□ -0.79
LINC00888-202ENST00000471496 MAPK3P27361 379 aaPredicted RBP10.13□□□□□ -0.79
LINC00888-202ENST00000471496 ERVFRD-1P60508 538 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 RPS25P62851 125 aaKnown RBP10.13□□□□□ -0.79
LINC00888-202ENST00000471496 KLRD1Q13241 179 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 SSX1Q16384 188 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 GPR157Q5UAW9 335 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 FIP1L1Q6UN15 594 aaKnown RBP10.13□□□□□ -0.79
LINC00888-202ENST00000471496 CDH26Q8IXH8 852 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 SPARTQ8N0X7 666 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 SIGLECL1Q8N7X8 197 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 ZNF418Q8TF45 676 aaPredicted RBP10.13□□□□□ -0.79
LINC00888-202ENST00000471496 THRSPQ92748 146 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 TMEM203Q969S6 136 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 SUCNR1Q9BXA5 334 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 YTHDF1Q9BYJ9 559 aaKnown RBP10.13□□□□□ -0.79
LINC00888-202ENST00000471496 FAM192AQ9GZU8 254 aa10.13□□□□□ -0.79
LINC00888-202ENST00000471496 MS4A7Q9GZW8 240 aaPredicted RBP10.13□□□□□ -0.79
LINC00888-202ENST00000471496 EXOSC4Q9NPD3 245 aaKnown RBP10.13□□□□□ -0.79
LINC00888-202ENST00000471496 A0A1W2PP11 408 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 MEX3AA1L020 520 aaKnown RBP10.12□□□□□ -0.79
LINC00888-202ENST00000471496 SLC33A1O00400 549 aaPredicted RBP10.12□□□□□ -0.79
LINC00888-202ENST00000471496 GABRR1P24046 479 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 PRTN3P24158 256 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 BPIFB3P59826 476 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 GRK1Q15835 563 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 DEFB112Q30KQ8 113 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 PIGYQ3MUY2 71 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 NHLRC3Q5JS37 347 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 GDPD3Q7L5L3 318 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 ZNF367Q7RTV3 350 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 CEACAM19Q7Z692 300 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 PDZD9Q8IXQ8 264 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 CMTM4Q8IZR5 234 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 TPRX1Q8N7U7 411 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 OR4D6Q8NGJ1 314 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 OR5D13Q8NGL4 314 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 MUL1Q969V5 352 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 METTL8Q9H825 291 aaKnown RBP10.12□□□□□ -0.79
LINC00888-202ENST00000471496 ING4Q9UNL4 249 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 DNHD1Q96M86 4753 aa10.12□□□□□ -0.79
LINC00888-202ENST00000471496 TRAV24A0A0B4J272 114 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 C17orf98A8MV24 154 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 MGST3O14880 152 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 HTR3BO95264 441 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 CSN2P05814 226 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 ERP29P30040 261 aaKnown RBP10.11□□□□□ -0.79
LINC00888-202ENST00000471496 BMXP51813 675 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 EDDM3BP56851 147 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 FABP5Q01469 135 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 EDDM3AQ14507 147 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 IL13RA2Q14627 380 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 RSU1Q15404 277 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 PNKDQ8N490 385 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 JAGN1Q8N5M9 183 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 CHST4Q8NCG5 386 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 TBC1D15Q8TC07 691 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 PHYHIPQ92561 330 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 COQ2Q96H96 371 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 NR1H4Q96RI1 486 aaPredicted RBP10.11□□□□□ -0.79
LINC00888-202ENST00000471496 METTL9Q9H1A3 318 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 PPA2Q9H2U2 334 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 GLS2Q9UI32 602 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 LRRC42Q9Y546 428 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 TENM1Q9UKZ4 2725 aa10.11□□□□□ -0.79
LINC00888-202ENST00000471496 RNF212BA8MTL3 300 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 DEGS1O15121 323 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 RRP9O43818 475 aaKnown RBP10.1□□□□□ -0.79
LINC00888-202ENST00000471496 ZNF44P15621 663 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 SRMP19623 302 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 GABRA5P31644 462 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 P2RX3P56373 397 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 RBM11P57052 281 aaKnown RBP10.1□□□□□ -0.79
LINC00888-202ENST00000471496 MEF2CQ06413 473 aaPredicted RBP10.1□□□□□ -0.79
LINC00888-202ENST00000471496 SCN1BQ07699 218 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 UBE2UQ5VVX9 321 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 OSR2Q8N2R0 312 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 NKAIN3Q8N8D7 197 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 TMEM158Q8WZ71 300 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 AJUBAQ96IF1 538 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 GFI1Q99684 422 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 IFT22Q9H7X7 185 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 MRPS28Q9Y2Q9 187 aaKnown RBP10.1□□□□□ -0.79
LINC00888-202ENST00000471496 STAB1Q9NY15 2570 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 A0A0U1RQK1 487 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 MEGF11A6BM72 1044 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 DNAJC9-AS1A6NH13 148 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 ZNF728P0DKX0 622 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 SERPINA2P20848 420 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 PSMA1P25786 263 aaKnown RBP10.1□□□□□ -0.79
LINC00888-202ENST00000471496 GLIPR1P48060 266 aa10.1□□□□□ -0.79
LINC00888-202ENST00000471496 UBE2E1P51965 193 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms