RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 MICU2Q8IYU8 434 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 FTMTQ8N4E7 242 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 OR10H4Q8NGA5 316 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 OR4F6Q8NGB9 312 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 ZNF418Q8TF45 676 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-204ENST00000471245 PYROXD1Q8WU10 500 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 OXGR1Q96P68 337 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 HIST1H4GQ99525 98 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 RGCCQ9H4X1 137 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 PTGES2Q9H7Z7 377 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 TNFRSF19Q9NS68 423 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 THUMPD1Q9NXG2 353 aaKnown RBP4.04□□□□□ -1.76
CKS1B-204ENST00000471245 PITPNC1Q9UKF7 332 aa4.04□□□□□ -1.76
CKS1B-204ENST00000471245 MCTS1Q9ULC4 181 aaKnown RBP4.04□□□□□ -1.76
CKS1B-204ENST00000471245 IGHV3OR16-13A0A075B7E8 117 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 A0A0G2JRQ6 117 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 LOC100653049A0A140TA62 436 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 GOLGA6L10A6NI86 522 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 ZNF701M0R085 212 aaPredicted RBP4.03□□□□□ -1.76
CKS1B-204ENST00000471245 TNFSF11O14788 317 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 EIF3HO15372 352 aaKnown RBP eCLIP4.03□□□□□ -1.76
CKS1B-204ENST00000471245 RAD51CO43502 376 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 KRT34O76011 436 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 KLHL2O95198 593 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 HSPB1P04792 205 aaKnown RBP4.03□□□□□ -1.76
CKS1B-204ENST00000471245 RPS17P08708 135 aaKnown RBP4.03□□□□□ -1.76
CKS1B-204ENST00000471245 TACSTD2P09758 323 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 TUBG1P23258 451 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 IL12BP29460 328 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 MAGEA12P43365 314 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 OR3A4PP47883 348 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 CCNG1P51959 295 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 RAB11AP62491 216 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 ZNF45Q02386 682 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 SCRN3Q0VDG4 424 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 OR5I1Q13606 314 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 RAB11BQ15907 218 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 TIMM23BQ5SRD1 257 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 ZNF544Q6NX49 715 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 Q6ZT83 130 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 PAGE2Q7Z2X7 111 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 ERI1Q8IV48 349 aaKnown RBP4.03□□□□□ -1.76
CKS1B-204ENST00000471245 RDH10Q8IZV5 341 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 FAM110BQ8TC76 370 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 MARCH1Q8TCQ1 289 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 C16orf78Q8WTQ4 265 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 ABHD3Q8WU67 409 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 EXOSC8Q96B26 276 aaKnown RBP4.03□□□□□ -1.76
CKS1B-204ENST00000471245 MUCL1Q96DR8 90 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 FMO2Q99518 471 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 PPA2Q9H2U2 334 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 ELOVL6Q9H5J4 265 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 MYOZ1Q9NP98 299 aaPredicted RBP4.03□□□□□ -1.76
CKS1B-204ENST00000471245 RPS10P5Q9NQ39 176 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 TUBG2Q9NRH3 451 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 MRPL22Q9NWU5 206 aaKnown RBP4.03□□□□□ -1.76
CKS1B-204ENST00000471245 PAQR5Q9NXK6 330 aaPredicted RBP4.03□□□□□ -1.76
CKS1B-204ENST00000471245 VSIG4Q9Y279 399 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 N6AMT1Q9Y5N5 214 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 DNAH3Q8TD57 4116 aa4.03□□□□□ -1.76
CKS1B-204ENST00000471245 OR5H1A6NKK0 313 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 OR5B21A6NL26 309 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 SYCE1LA8MT33 242 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 A8MT66 165 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 UPK1AO00322 258 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 MANBAO00462 879 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 CHST1O43916 411 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 UTS2O95399 124 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 CSTAP01040 98 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF17P17021 662 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 TCP1P17987 556 aaKnown RBP4.02□□□□□ -1.77
CKS1B-204ENST00000471245 GGT1P19440 569 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 STOMP27105 288 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 VHLP40337 213 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 KIR2DS4P43632 304 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 YAP1P46937 504 aaKnown RBP4.02□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF83P51522 516 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 PLTPP55058 493 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 ZNF239Q16600 458 aaKnown RBP4.02□□□□□ -1.77
CKS1B-204ENST00000471245 FAM83EQ2M2I3 478 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 PLPPR5Q32ZL2 321 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 HBMQ6B0K9 141 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 SSX8Q7RTT4 187 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 IQCF2Q8IXL9 164 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 TMEM252Q8N6L7 170 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 LINC00612Q8N6U2 182 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 ZDHHC22Q8N966 263 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 GATSQ8NAP1 163 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 OR2V1Q8NHB1 315 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 CDKL2Q92772 493 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 PLEKHA8Q96JA3 519 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 RNF145Q96MT1 663 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 SIKE1Q9BRV8 207 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 NICN1Q9BSH3 213 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 EBPLQ9BY08 206 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 SDHAF3Q9NRP4 125 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 INPP5EQ9NRR6 644 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 MED29Q9NX70 200 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 AHSPQ9NZD4 102 aa4.02□□□□□ -1.77
CKS1B-204ENST00000471245 VPS29Q9UBQ0 182 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms