RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 BCL6BQ8N143 479 aaPredicted RBP16.21■□□□□ 0.19
HDAC7-220ENST00000471235 FOXRED1Q96CU9 486 aaPredicted RBP16.21■□□□□ 0.19
HDAC7-220ENST00000471235 OCEL1Q9H607 264 aa16.21■□□□□ 0.19
HDAC7-220ENST00000471235 ZNF696Q9H7X3 374 aa16.21■□□□□ 0.19
HDAC7-220ENST00000471235 TRAV24A0A0B4J272 114 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 HSPB6O14558 160 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 GEMIN2O14893 280 aaKnown RBP16.2■□□□□ 0.18
HDAC7-220ENST00000471235 CSN2P05814 226 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 CD37P11049 281 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 GTF2F2P13984 249 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 DLX6P56179 175 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 P2RX3P56373 397 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 KLRD1Q13241 179 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 BLMHQ13867 455 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 ATXN7L3Q14CW9 347 aaPredicted RBP16.2■□□□□ 0.18
HDAC7-220ENST00000471235 KRTAP21-3Q3LHN1 58 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 PAN3Q58A45 887 aaKnown RBP16.2■□□□□ 0.18
HDAC7-220ENST00000471235 SYT6Q5T7P8 510 aaPredicted RBP16.2■□□□□ 0.18
HDAC7-220ENST00000471235 C1orf122Q6ZSJ8 110 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 LINC00596Q86U02 117 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 COQ2Q96H96 371 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 MS4A7Q9GZW8 240 aaPredicted RBP16.2■□□□□ 0.18
HDAC7-220ENST00000471235 PCDHB16Q9NRJ7 776 aa16.2■□□□□ 0.18
HDAC7-220ENST00000471235 SOX21Q9Y651 276 aaPredicted RBP16.2■□□□□ 0.18
HDAC7-220ENST00000471235 IGHV1-69DA0A0B4J2H0 117 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 A0A1W2PPH5 198 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 SHISA3A0PJX4 238 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 RNASEK-C17orf49H0YIS7 233 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 IGHV1-69P01742 117 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 GALP22466 123 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 FPR2P25090 351 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 ERP29P30040 261 aaKnown RBP16.19■□□□□ 0.18
HDAC7-220ENST00000471235 MEF2CQ06413 473 aaPredicted RBP16.19■□□□□ 0.18
HDAC7-220ENST00000471235 MPV17LQ2QL34 196 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 METAP1DQ6UB28 335 aaPredicted RBP16.19■□□□□ 0.18
HDAC7-220ENST00000471235 PDZD9Q8IXQ8 264 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 TMEM104Q8NE00 496 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 TSPAN14Q8NG11 270 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 TNFRSF14Q92956 283 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 KCNK15Q9H427 330 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 BANF2Q9H503 90 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 IFT22Q9H7X7 185 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 METTL8Q9H825 291 aaKnown RBP16.19■□□□□ 0.18
HDAC7-220ENST00000471235 UNKLQ9H9P5 680 aaKnown RBP16.19■□□□□ 0.18
HDAC7-220ENST00000471235 STUB1Q9UNE7 303 aa16.19■□□□□ 0.18
HDAC7-220ENST00000471235 AK6Q9Y3D8 172 aaKnown RBP16.19■□□□□ 0.18
HDAC7-220ENST00000471235 A0A087WXM4 84 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 hADV38S2A0JD32 116 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 SLC22A1O15245 554 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 TCF21O43680 179 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 CRTAPO75718 401 aaPredicted RBP16.18■□□□□ 0.18
HDAC7-220ENST00000471235 OR7C1O76099 320 aaPredicted RBP16.18■□□□□ 0.18
HDAC7-220ENST00000471235 UBBP0CG47 229 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 MGMTP16455 207 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 PRTN3P24158 256 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 HTR2CP28335 458 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 SRSF2Q01130 221 aaKnown RBP16.18■□□□□ 0.18
HDAC7-220ENST00000471235 C22orf42Q6IC83 251 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 C11orf42Q8N5U0 333 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 OR6M1Q8NGM8 313 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 ZNF418Q8TF45 676 aaPredicted RBP16.18■□□□□ 0.18
HDAC7-220ENST00000471235 ZNF48Q96MX3 618 aaPredicted RBP16.18■□□□□ 0.18
HDAC7-220ENST00000471235 SUCNR1Q9BXA5 334 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 GHRLQ9UBU3 117 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 LINC00312Q9Y6C7 94 aa16.18■□□□□ 0.18
HDAC7-220ENST00000471235 TRAV1-2A0A0B4J238 106 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 SLC17A2O00624 439 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 MYL9P24844 172 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 GLIPR1P48060 266 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 AESQ08117 197 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 TAF9Q16594 264 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 KRBOX4Q5JUW0 171 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 NCR3LG1Q68D85 454 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 HCP5Q6MZN7 132 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 SUMF2Q8NBJ7 301 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 FAM46BQ96A09 425 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 MRPS24Q96EL2 167 aaKnown RBP16.17■□□□□ 0.18
HDAC7-220ENST00000471235 Q96M66 194 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 ING3Q9NXR8 418 aa16.17■□□□□ 0.18
HDAC7-220ENST00000471235 MDFIC2A0A1B0GVS7 189 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 ODAMA1E959 279 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 FUOMA2VDF0 154 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 C17orf98A8MV24 154 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 ZNF728P0DKX0 622 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 VSIG8P0DPA2 414 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 FGF9P31371 208 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-220ENST00000471235 BPIFB3P59826 476 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 ERVFRD-1P60508 538 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 GUCA2AQ02747 115 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 P2RY14Q15391 338 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 USP43Q70EL4 1123 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 SIGLECL1Q8N7X8 197 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 PLPPR1Q8TBJ4 325 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 SLC25A28Q96A46 364 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 ZNF714Q96N38 554 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 DPCDQ9BVM2 203 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-220ENST00000471235 SELENOIQ9C0D9 397 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 CST11Q9H112 138 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 PLGRKTQ9HBL7 147 aa16.16■□□□□ 0.18
HDAC7-220ENST00000471235 TXNL4BQ9NX01 149 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms