RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 ERVS71-1P61550 626 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 TRIM61Q5EBN2 209 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 NUP54Q7Z3B4 507 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 PLPP5Q8NEB5 264 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 PTPMT1Q8WUK0 201 aaPredicted RBP6.92□□□□□ -1.3
TPM3-215ENST00000469717 ZNF665Q9H7R5 613 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 PLSCR2Q9NRY7 297 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 VDAC3Q9Y277 283 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 STRAPQ9Y3F4 350 aaKnown RBP6.92□□□□□ -1.3
TPM3-215ENST00000469717 A0A1W2PR80 420 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 ZNF850A8MQ14 1090 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 NPIPA5E9PKD4 350 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 SSSCA1O60232 199 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 SUCLG1P53597 346 aaKnown RBP6.92□□□□□ -1.3
TPM3-215ENST00000469717 TAS2R46P59540 309 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 HLA-DRB3P79483 266 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 ZFP36L1Q07352 338 aaKnown RBP6.92□□□□□ -1.3
TPM3-215ENST00000469717 RTP5Q14D33 572 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 TAF9Q16594 264 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 CXorf66Q5JRM2 361 aaPredicted RBP6.92□□□□□ -1.3
TPM3-215ENST00000469717 HLA-DQA1Q5Y7H0 255 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 C1orf87Q8N0U7 546 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 FBXL14Q8N1E6 418 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 SLC35G3Q8N808 338 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 OR5C1Q8NGR4 320 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 OR5R1Q8NH85 324 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 SLC37A2Q8TED4 501 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 BOD1Q96IK1 185 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 NPIPA1Q9UND3 350 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 LHFPL6Q9Y693 200 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 TMEM131Q92545 1883 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 A0A0J9YY10 115 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 NKX2-6A6NCS4 301 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 TOX3O15405 576 aaPredicted RBP6.92□□□□□ -1.3
TPM3-215ENST00000469717 PHF1O43189 567 aaPredicted RBP6.92□□□□□ -1.3
TPM3-215ENST00000469717 TMEM50AO95807 157 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 HLA-HP01893 362 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 GP1BBP13224 206 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 FAHP16930 419 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 PGCP20142 388 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 WNT5AP41221 380 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 BIDP55957 195 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 KISS1Q15726 138 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 LYSMD4Q5XG99 296 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 MYPOPQ86VE0 399 aaPredicted RBP6.92□□□□□ -1.3
TPM3-215ENST00000469717 ARHGEF39Q8N4T4 335 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 TP53RKQ96S44 253 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 CABLES2Q9BTV7 478 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 ELOVL1Q9BW60 279 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 ROS1P08922 2347 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 RALGAPA1Q6GYQ0 2036 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 A0A087WWC5 75 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 NPIPB7O75200 414 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 CRYABP02511 175 aaKnown RBP6.92□□□□□ -1.3
TPM3-215ENST00000469717 FOLR1P15328 257 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 GZMHP20718 246 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 MSX1P28360 303 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 OR1D4P47884 311 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 GNB2P62879 340 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 FOXF1Q12946 379 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 FAM90A2PQ658T7 463 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 SLC25A24Q6NUK1 477 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 ODF3L1Q8IXM7 274 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 CLDND2Q8NHS1 167 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 ASB10Q8WXI3 467 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 TMEM37Q8WXS4 190 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 BMFQ96LC9 184 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 URM1Q9BTM9 101 aaKnown RBP6.92□□□□□ -1.3
TPM3-215ENST00000469717 TBL1XR1Q9BZK7 514 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 VSIRQ9H7M9 311 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 KIAA1456Q9P272 454 aa6.92□□□□□ -1.3
TPM3-215ENST00000469717 XKRY2A2RUG3 117 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 C5orf67F2Z3F1 127 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 ST8SIA3O43173 380 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 ZNF43P17038 809 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 COL9A1P20849 921 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 RPL29P47914 159 aaKnown RBP6.91□□□□□ -1.3
TPM3-215ENST00000469717 PMS2P11Q13670 270 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 ABCA11PQ4W5N1 156 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 LCN15Q6UWW0 184 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 TMEM183AQ8IXX5 376 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 OR2C3Q8N628 320 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 OR6X1Q8NH79 312 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 C5orf34Q96MH7 638 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 HIST1H2AAQ96QV6 131 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 KCNK17Q96T54 332 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 CHST11Q9NPF2 352 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 SLC2A9Q9NRM0 540 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 PLEKHJ1Q9NW61 149 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 SUSD2Q9UGT4 822 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 PROB1E7EW31 1015 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 CTSDP07339 412 aaPredicted RBP6.91□□□□□ -1.3
TPM3-215ENST00000469717 HNF1AP20823 631 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 ALDH3B1P43353 468 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 DYNLT3P51808 116 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 ELLP55199 621 aaPredicted RBP6.91□□□□□ -1.3
TPM3-215ENST00000469717 MRPS21P82921 87 aaKnown RBP6.91□□□□□ -1.3
TPM3-215ENST00000469717 ZNF154Q13106 437 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 SSX7Q7RTT5 188 aa6.91□□□□□ -1.3
TPM3-215ENST00000469717 LFNGQ8NES3 379 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms