RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 E5RGE8 158 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 K7N7A8 449 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 QDPRP09417 244 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 AMY2BP19961 511 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 GLIPR1P48060 266 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 TNFRSF9Q07011 255 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 ZP4Q12836 540 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 ATP1A1-AS1Q5TC04 95 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 FAM213BQ8TBF2 198 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 POM121Q96HA1 1249 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 UCN2Q96RP3 112 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 METTL9Q9H1A3 318 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 NSG2Q9Y328 171 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 MED13Q9UHV7 2174 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 PHF3Q92576 2039 aaKnown RBP12.07□□□□□ -0.48
GPC1-208ENST00000469694 H0YL77 283 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 CDAP32320 146 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 DAP3P51398 398 aaKnown RBP12.07□□□□□ -0.48
GPC1-208ENST00000469694 CCL20P78556 96 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 ADAT3Q96EY9 351 aaPredicted RBP12.07□□□□□ -0.48
GPC1-208ENST00000469694 SPACA5Q96QH8 159 aa12.07□□□□□ -0.48
GPC1-208ENST00000469694 DVL1O14640 695 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 SCGB1D2O95969 90 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 IFNA21P01568 189 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 OR5H8P0DN80 308 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 GZMBP10144 247 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 RNF144BQ7Z419 303 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 UEVLDQ8IX04 471 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 HSD17B11Q8NBQ5 300 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 SLC26A10Q8NG04 563 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 FRYQ5TBA9 3013 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 A0A087WZY1 265 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 PINLYPA6NC86 204 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 TRAF3IP2O43734 574 aaPredicted RBP12.06□□□□□ -0.48
GPC1-208ENST00000469694 IGHEP01854 428 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 SRP19P09132 144 aaKnown RBP12.06□□□□□ -0.48
GPC1-208ENST00000469694 PLXDC2Q6UX71 529 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 ZNF429Q86V71 674 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 MRPL24Q96A35 216 aaKnown RBP12.06□□□□□ -0.48
GPC1-208ENST00000469694 ST6GALNAC5Q9BVH7 336 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 HES7Q9BYE0 225 aa12.06□□□□□ -0.48
GPC1-208ENST00000469694 C14orf166Q9Y224 244 aaKnown RBP12.06□□□□□ -0.48
GPC1-208ENST00000469694 MUC6Q6W4X9 2439 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 GPR137BO60478 399 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 MPIG6BO95866 241 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 MBPP02686 304 aaPredicted RBP12.05□□□□□ -0.48
GPC1-208ENST00000469694 ZNF93P35789 620 aaPredicted RBP12.05□□□□□ -0.48
GPC1-208ENST00000469694 RND3P61587 244 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 GPR157Q5UAW9 335 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 TMEM182Q6ZP80 229 aaPredicted RBP12.05□□□□□ -0.48
GPC1-208ENST00000469694 SGPP2Q8IWX5 399 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 TVP23CQ96ET8 276 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 RCC1LQ96I51 464 aaKnown RBP12.05□□□□□ -0.48
GPC1-208ENST00000469694 ATG101Q9BSB4 218 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 EHFQ9NZC4 300 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 KMT2EQ8IZD2 1858 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 TNFSF11O14788 317 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 EREGO14944 169 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 CYTIPO60759 359 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 P04436 131 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 SERPINA7P05543 415 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 NUBP1P53384 320 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 GLIPR1L1Q6UWM5 242 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 RNASEH2CQ8TDP1 164 aaKnown RBP12.05□□□□□ -0.48
GPC1-208ENST00000469694 ARHGAP5-AS1Q96IT6 56 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 FAM210BQ96KR6 192 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 PLA2G3Q9NZ20 509 aa12.05□□□□□ -0.48
GPC1-208ENST00000469694 A6NIZ1 184 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 TRAPPC6AO75865 159 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 ZNF43P17038 809 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 SNU13P55769 128 aaKnown RBP12.04□□□□□ -0.48
GPC1-208ENST00000469694 DSCR4P56555 118 aaPredicted RBP12.04□□□□□ -0.48
GPC1-208ENST00000469694 TAS2R46P59540 309 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 RAP1BP61224 184 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 CSNK2A1P68400 391 aaPredicted RBP12.04□□□□□ -0.48
GPC1-208ENST00000469694 ARFRP1Q13795 201 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 C4orf17Q53FE4 359 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 LINC00696Q6ZRV3 163 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 GALNTL5Q7Z4T8 443 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 CSNK2A3Q8NEV1 391 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 OR5D14Q8NGL3 314 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 C1orf147Q96MC9 270 aaPredicted RBP12.04□□□□□ -0.48
GPC1-208ENST00000469694 ACTR3CQ9C0K3 210 aaPredicted RBP12.04□□□□□ -0.48
GPC1-208ENST00000469694 FOXD3Q9UJU5 478 aaPredicted RBP12.04□□□□□ -0.48
GPC1-208ENST00000469694 PITPNC1Q9UKF7 332 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 SPTBN2O15020 2390 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 DCHS1Q96JQ0 3298 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 A0A1W2PNV4 684 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 CDC14BO60729 498 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 ZNF823P16415 610 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 G0S2P27469 103 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 CYB561P49447 251 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 CEBPGP53567 150 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 CLRN1P58418 232 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 SPSB3Q6PJ21 355 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 IL22RA1Q8N6P7 574 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 C11orf40Q8WZ69 217 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 SGCZQ96LD1 299 aa12.04□□□□□ -0.48
GPC1-208ENST00000469694 MRPL13Q9BYD1 178 aaKnown RBP12.04□□□□□ -0.48
GPC1-208ENST00000469694 BANF2Q9H503 90 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms