RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ESCO2Q56NI9 601 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 TOR2AQ5JU69 321 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 Q6ZPA2 131 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF611Q8N823 705 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 DUSP18Q8NEJ0 188 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 TMEM171Q8WVE6 324 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 DMRTB1Q96MA1 342 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 C7orf50Q9BRJ6 194 aaKnown RBP7.02□□□□□ -1.29
BRCA1-208ENST00000468300 VCX2Q9H322 139 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 SDHAF2Q9NX18 166 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 MTFP1Q9UDX5 166 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 PURGQ9UJV8 347 aaKnown RBP7.02□□□□□ -1.29
BRCA1-208ENST00000468300 ANAPC10Q9UM13 185 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 NKX2-6A6NCS4 301 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF732B4DXR9 585 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 SYNGR1O43759 233 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 IFNA6P05013 189 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 CD1BP29016 333 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 UQCRFS1P47985 274 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 ATP1B3P54709 279 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 MAB21L1Q13394 359 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 PIGYQ3MUY2 71 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 C9orf152Q5JTZ5 239 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 HACD4Q5VWC8 232 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 NUDT10Q8NFP7 164 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 FCAMRQ8WWV6 532 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 CNTNAP3BQ96NU0 1288 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 TMEM59Q9BXS4 323 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 CNTNAP3Q9BZ76 1288 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 MMP28Q9H239 520 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.02□□□□□ -1.29
BRCA1-208ENST00000468300 RBFOX1Q9NWB1 397 aaKnown RBP7.02□□□□□ -1.29
BRCA1-208ENST00000468300 MEIS3P1A6NDR6 274 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 ARPC5O15511 151 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 SCGB2A1O75556 95 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 TMEM225BP0DP42 221 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 SNTB1Q13884 538 aaKnown RBP7.02□□□□□ -1.29
BRCA1-208ENST00000468300 CDNFQ49AH0 187 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 SPRNQ5BIV9 151 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 TRIQKQ629K1 86 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 PNLDC1Q8NA58 520 aaKnown RBP7.02□□□□□ -1.29
BRCA1-208ENST00000468300 OR8G5Q8NG78 346 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 CACNG8Q8WXS5 425 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 UPRTQ96BW1 309 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 IL36RNQ9UBH0 155 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 SLC7A11Q9UPY5 501 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 ALG5Q9Y673 324 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 IGLV3-9A0A075B6K5 115 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 SIAH2O43255 324 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 SELEP16581 610 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 BCL3P20749 454 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 MRPS10P82664 201 aaKnown RBP7.01□□□□□ -1.29
BRCA1-208ENST00000468300 HOXA4Q00056 320 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-208ENST00000468300 ACTBL2Q562R1 376 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 SFRP4Q6FHJ7 346 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-208ENST00000468300 ELP2Q6IA86 826 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 FAAP20Q6NZ36 180 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 SLC25A26Q70HW3 274 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 SAXO1Q8IYX7 474 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 BATF2Q8N1L9 274 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 ZSCAN4Q8NAM6 433 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-208ENST00000468300 OR51F2Q8NH61 342 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 MUCL1Q96DR8 90 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 ARHGAP5-AS1Q96IT6 56 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF48Q96MX3 618 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-208ENST00000468300 BBC3Q96PG8 261 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-208ENST00000468300 SELENOIQ9C0D9 397 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 HRASLSQ9HDD0 168 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 DNAJB11Q9UBS4 358 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 LRBAP50851 2863 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 CHD3Q12873 2000 aaKnown RBP7.01□□□□□ -1.29
BRCA1-208ENST00000468300 ANKRD30BLA7E2S9 258 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 HIST1H1DP16402 221 aaKnown RBP7.01□□□□□ -1.29
BRCA1-208ENST00000468300 CHRNB4P30926 498 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 MC5RP33032 325 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 ASCL1P50553 236 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 FABP6P51161 128 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 ERVK11-1P61568 191 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 BTN1A1Q13410 526 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 PRAMEF5Q5TYX0 476 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 PRAMEF6Q5VXH4 476 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 Q6ZTK2 550 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 ZFP82Q8N141 532 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 SLAMF9Q96A28 289 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 TLNRD1Q9H1K6 362 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 PPA2Q9H2U2 334 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 OR51M1Q9H341 326 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 HEATR1Q9H583 2144 aaKnown RBP7.01□□□□□ -1.29
BRCA1-208ENST00000468300 MGAT4CQ9UBM8 478 aa7.01□□□□□ -1.29
BRCA1-208ENST00000468300 GEMIN2O14893 280 aaKnown RBP7□□□□□ -1.29
BRCA1-208ENST00000468300 IGHV3-13P01766 116 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 MT-ND4P03905 459 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 CHRM2P08172 466 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 LOXP28300 417 aaPredicted RBP7□□□□□ -1.29
BRCA1-208ENST00000468300 DEFA1P59665 94 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 DEFA3P59666 94 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 SNTB2Q13425 540 aaKnown RBP7□□□□□ -1.29
BRCA1-208ENST00000468300 TGIF2LXQ8IUE1 241 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 TOMM5Q8N4H5 51 aa7□□□□□ -1.29
BRCA1-208ENST00000468300 GVQW1Q8N7I0 195 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms