RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 MEGF9Q9H1U4 602 aa9.37□□□□□ -0.91
CDHR3-205ENST00000468143 RHOFQ9HBH0 211 aa9.37□□□□□ -0.91
CDHR3-205ENST00000468143 CNOT2Q9NZN8 540 aaKnown RBP9.37□□□□□ -0.91
CDHR3-205ENST00000468143 MMP24Q9Y5R2 645 aa9.37□□□□□ -0.91
CDHR3-205ENST00000468143 LINC00312Q9Y6C7 94 aa9.37□□□□□ -0.91
CDHR3-205ENST00000468143 TRAV8-7A0A075B6U6 113 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 TRBV5-5A0A0J9YX44 114 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 MAGEA13PA6NCF6 341 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 MYL12BO14950 172 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 ALDOBP05062 364 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 CELP19835 753 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 ERP29P30040 261 aaKnown RBP9.36□□□□□ -0.91
CDHR3-205ENST00000468143 BDKRB2P30411 391 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 ZNF93P35789 620 aaPredicted RBP9.36□□□□□ -0.91
CDHR3-205ENST00000468143 PTGFRP43088 359 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 WNT4P56705 351 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 KRTAP10-3P60369 221 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 RIPK1Q13546 671 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 SSX2Q16385 188 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 PIGYQ3MUY2 71 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 Q499Y3 187 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 KRBOX4Q5JUW0 171 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 C6orf141Q5SZD1 244 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 LDLRAD2Q5SZI1 272 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 PRAMEF5Q5TYX0 476 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 DHRS7BQ6IAN0 325 aaPredicted RBP9.36□□□□□ -0.91
CDHR3-205ENST00000468143 NANOGP1Q8N7R0 232 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 PXT1Q8NFP0 134 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 OR5R1Q8NH85 324 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 SGMS2Q8NHU3 365 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 LINC01006Q8NI28 216 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 SGCDQ92629 289 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 COQ2Q96H96 371 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 OR14A2Q96R54 314 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 PPIL3Q9H2H8 161 aaKnown RBP9.36□□□□□ -0.91
CDHR3-205ENST00000468143 TMEM138Q9NPI0 162 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 FKBP14Q9NWM8 211 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 ZNF581Q9P0T4 197 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 RNF114Q9Y508 228 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 SESN1Q9Y6P5 492 aa9.36□□□□□ -0.91
CDHR3-205ENST00000468143 TRGV10A0A0A0MS01 117 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 TRAV24A0A0B4J272 114 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 A0A1B0GUS0 222 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 FAM172BPA6NC97 362 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 FAM90A8PA6NJQ4 464 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 ODF3BA8MYP8 253 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 RBP4P02753 201 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 MAS1P04201 325 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 CDK1P06493 297 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 JUNBP17275 347 aaPredicted RBP9.35□□□□□ -0.91
CDHR3-205ENST00000468143 IGFBP3P17936 291 aaPredicted RBP9.35□□□□□ -0.91
CDHR3-205ENST00000468143 CDK2P24941 298 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 TGFBR2P37173 567 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 GDNFP39905 211 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 RPL15P61313 204 aaKnown RBP9.35□□□□□ -0.91
CDHR3-205ENST00000468143 FAM189A2Q15884 450 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 LRRC75BQ2VPJ9 315 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 YIF1BQ5BJH7 314 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 ZNF626Q68DY1 528 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 ELP2Q6IA86 826 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 SLC35E4Q6ICL7 350 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 ASCL4Q6XD76 172 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 CHST4Q8NCG5 386 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 OR11H6Q8NGC7 330 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 PIFOQ8TCI5 191 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 CPNE2Q96FN4 548 aaPredicted RBP9.35□□□□□ -0.91
CDHR3-205ENST00000468143 S100A13Q99584 98 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 ZNF184Q99676 751 aaPredicted RBP9.35□□□□□ -0.91
CDHR3-205ENST00000468143 METTL9Q9H1A3 318 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 TMEM133Q9H2Q1 129 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 ERGIC3Q9Y282 383 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 SIGLEC9Q9Y336 463 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 UBE2J1Q9Y385 318 aaPredicted RBP9.35□□□□□ -0.91
CDHR3-205ENST00000468143 HILPDAQ9Y5L2 63 aa9.35□□□□□ -0.91
CDHR3-205ENST00000468143 IGHV2-26A0A0B4J1V2 119 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 TRAV39A0A0B4J263 110 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 A0A1W2PP11 408 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 ODAMA1E959 279 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 FUOMA2VDF0 154 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 PIN1P1O15428 100 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 CLPXO76031 633 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 CSTBP04080 98 aaKnown RBP9.34□□□□□ -0.91
CDHR3-205ENST00000468143 SERPINA2P20848 420 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 TAS2R43P59537 309 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 INSL4Q14641 139 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 PAN3Q58A45 887 aaKnown RBP9.34□□□□□ -0.91
CDHR3-205ENST00000468143 UTF1Q5T230 341 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 BRICD5Q6PL45 260 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 ABHD12Q8N2K0 398 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 OSR2Q8N2R0 312 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 OR51T1Q8NGJ9 327 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 WFDC12Q8WWY7 111 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 CORO2AQ92828 525 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 MUL1Q969V5 352 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 MALSU1Q96EH3 234 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 OR5M11Q96RB7 305 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 GAL3ST2Q9H3Q3 398 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 PAK1IP1Q9NWT1 392 aaPredicted RBP9.34□□□□□ -0.91
CDHR3-205ENST00000468143 SCN3BQ9NY72 215 aa9.34□□□□□ -0.91
CDHR3-205ENST00000468143 CKLFQ9UBR5 152 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms