RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 OCEL1Q9H607 264 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 ZNF696Q9H7X3 374 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 IFT22Q9H7X7 185 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 METTL8Q9H825 291 aaKnown RBP11.18□□□□□ -0.62
SSBP1-206ENST00000467681 AK6Q9Y3D8 172 aaKnown RBP11.18□□□□□ -0.62
SSBP1-206ENST00000467681 A0A1W2PP11 408 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 hADV38S2A0JD32 116 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 FUOMA2VDF0 154 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 CSN2P05814 226 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 UBBP0CG47 229 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 FGF9P31371 208 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-206ENST00000467681 DLX6P56179 175 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 EDDM3BP56851 147 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 RBM11P57052 281 aaKnown RBP11.17□□□□□ -0.62
SSBP1-206ENST00000467681 EDDM3AQ14507 147 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 ZNF273Q14593 569 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 NEDD8Q15843 81 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 METAP1DQ6UB28 335 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-206ENST00000467681 C9orf139Q6ZV77 190 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 VMO1Q7Z5L0 202 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 BPIFB2Q8N4F0 458 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 LHX4Q969G2 390 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 SLC25A28Q96A46 364 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 MS4A7Q9GZW8 240 aaPredicted RBP11.17□□□□□ -0.62
SSBP1-206ENST00000467681 PPA2Q9H2U2 334 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 NCOR1P1Q9H4R4 102 aa11.17□□□□□ -0.62
SSBP1-206ENST00000467681 A0A0A6YYJ9 748 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 TRAV40A0A0B4J280 105 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 IGHV1-69DA0A0B4J2H0 117 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 hCG_1809904A0A1W2PP81 198 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 A0A1W2PPE2 198 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 A0A1W2PR64 198 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 A0A1W2PRV1 198 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 C17orf98A8MV24 154 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 GEMIN2O14893 280 aaKnown RBP11.16□□□□□ -0.62
SSBP1-206ENST00000467681 SLC22A1O15245 554 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 IGHV1-69P01742 117 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 ZNF728P0DKX0 622 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 HTR2CP28335 458 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 P2RX3P56373 397 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 AESQ08117 197 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 TAF9Q16594 264 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 MPV17LQ2QL34 196 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 PAN3Q58A45 887 aaKnown RBP11.16□□□□□ -0.62
SSBP1-206ENST00000467681 USP43Q70EL4 1123 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 LINC00596Q86U02 117 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 TPRX1Q8N7U7 411 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 TMEM104Q8NE00 496 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 C22orf15Q8WYQ4 148 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 CORO2AQ92828 525 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 BANF2Q9H503 90 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 SIRT7Q9NRC8 400 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 ZNF581Q9P0T4 197 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 STUB1Q9UNE7 303 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 SOX21Q9Y651 276 aaPredicted RBP11.16□□□□□ -0.62
SSBP1-206ENST00000467681 V9GY05 133 aa11.16□□□□□ -0.62
SSBP1-206ENST00000467681 DSCAML1Q8TD84 2053 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 NF1P21359 2839 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 SHISA3A0PJX4 238 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 TRIM64CA6NLI5 447 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 RNASEK-C17orf49H0YIS7 233 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 SLC17A2O00624 439 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 PDCD5O14737 125 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 CRTAPO75718 401 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-206ENST00000467681 OR7C1O76099 320 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-206ENST00000467681 MGMTP16455 207 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 CCL3L1P16619 93 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 JUNBP17275 347 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-206ENST00000467681 GLIPR1P48060 266 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 KCNJ3P48549 501 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 QRFPP83859 136 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 GUCA2AQ02747 115 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 KRBOX4Q5JUW0 171 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 NCR3LG1Q68D85 454 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 C22orf42Q6IC83 251 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 HCP5Q6MZN7 132 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 SUMF2Q8NBJ7 301 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 OR6M1Q8NGM8 313 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 ZNF418Q8TF45 676 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-206ENST00000467681 COQ2Q96H96 371 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 SLC6A7Q99884 636 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 DPCDQ9BVM2 203 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-206ENST00000467681 SUCNR1Q9BXA5 334 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 BARHL1Q9BZE3 327 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 SELENOIQ9C0D9 397 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 HEXA-AS1Q9H8Q6 139 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 TXNL4BQ9NX01 149 aaKnown RBP11.15□□□□□ -0.62
SSBP1-206ENST00000467681 SSR3Q9UNL2 185 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 UBE2J1Q9Y385 318 aaPredicted RBP11.15□□□□□ -0.62
SSBP1-206ENST00000467681 LINC00312Q9Y6C7 94 aa11.15□□□□□ -0.62
SSBP1-206ENST00000467681 SVEP1Q4LDE5 3571 aa11.14□□□□□ -0.63
SSBP1-206ENST00000467681 ODAMA1E959 279 aa11.14□□□□□ -0.63
SSBP1-206ENST00000467681 FAM90A10PA6NDY2 464 aa11.14□□□□□ -0.63
SSBP1-206ENST00000467681 FAM90A18PA6NE21 464 aa11.14□□□□□ -0.63
SSBP1-206ENST00000467681 FAM90A16PA6NEW6 464 aa11.14□□□□□ -0.63
SSBP1-206ENST00000467681 FAM90A20PA6NIJ5 464 aa11.14□□□□□ -0.63
SSBP1-206ENST00000467681 FAM90A8PA6NJQ4 464 aa11.14□□□□□ -0.63
SSBP1-206ENST00000467681 FAM90A7PA6NKC0 464 aa11.14□□□□□ -0.63
SSBP1-206ENST00000467681 FAM90A22PA8MWA6 464 aa11.14□□□□□ -0.63
SSBP1-206ENST00000467681 FAM90A12PA8MX19 464 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms