RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	OR11L1	Q8NGX0	322 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663		Q8TCH9	128 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	MEGF10	Q96KG7	1140 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	NEDD4L	Q96PU5	975 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	ABHD1	Q96SE0	405 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	SDHC	Q99643	169 aa	Predicted RBP	10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	NRIP2	Q9BQI9	281 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	C7orf50	Q9BRJ6	194 aa	Known RBP	10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	THAP7	Q9BT49	309 aa	Predicted RBP	10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	BANF2	Q9H503	90 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	NARFL	Q9H6Q4	476 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	AUNIP	Q9H7T9	357 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	HES4	Q9HCC6	221 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	TREM2	Q9NZC2	230 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	MTCH1	Q9NZJ7	389 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	ST3GAL6	Q9Y274	331 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	CACNG2	Q9Y698	323 aa		10.1	□□□□□ -0.79
CTNS-205	ENST00000467663	TANC2	Q9HCD6	1990 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663		A6NLC8	198 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	CENPX	A8MT69	81 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.09	□□□□□ -0.79
CTNS-205	ENST00000467663		H0YL77	283 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	CDIPT	O14735	213 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	RBBP9	O75884	186 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	PLAT	P00750	562 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	LPL	P06858	475 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	GRP	P07492	148 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	SFTPB	P07988	381 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	MSMB	P08118	114 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	FUT3	P21217	361 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	BLVRB	P30043	206 aa	Predicted RBP	10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	DYRK1A	Q13627	763 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	ZNF146	Q15072	292 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	HFE	Q30201	348 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	SMIM21	Q3B7S5	101 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	DMRTC1	Q5HYR2	192 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	WDR86	Q86TI4	376 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	LYSMD2	Q8IV50	215 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	C1orf87	Q8N0U7	546 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	CHST4	Q8NCG5	386 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	OR10AD1	Q8NGE0	317 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	SLAMF9	Q96A28	289 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	TMEM186	Q96B77	213 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	OR2V2	Q96R30	315 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	PLEKHJ1	Q9NW61	149 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	MTFP1	Q9UDX5	166 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	RBMX2	Q9Y388	322 aa	Known RBP	10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	WIPI2	Q9Y4P8	454 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	NPTN	Q9Y639	398 aa		10.09	□□□□□ -0.79
CTNS-205	ENST00000467663	DYSF	O75923	2080 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	CUBN	O60494	3623 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	NAP1L6	A6NFF2	107 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	LRRC30	A6NM36	301 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	MFNG	O00587	321 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	SYNGR1	O43759	233 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	PDCD6	O75340	191 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	KNG1	P01042	644 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	IRF2	P14316	349 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	BCL3	P20749	454 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	FAU	P35544	74 aa	Known RBP	10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	KCNJ3	P48549	501 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	PLA2G7	Q13093	441 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	RBM39	Q14498	530 aa	Known RBP	10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	RGS21	Q2M5E4	152 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	CDNF	Q49AH0	187 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	AVPI1	Q5T686	147 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	MZT2B	Q6NZ67	158 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	WDR82	Q6UXN9	313 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	SNX29P2	Q8IUI4	249 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	C11orf53	Q8IXP5	236 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	OR10K1	Q8NGX5	313 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	GPX8	Q8TED1	209 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	CCL17	Q92583	94 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	RAB1C	Q92928	201 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	EMG1	Q92979	244 aa	Known RBP	10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	DVL3	Q92997	716 aa	Predicted RBP	10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	TIMD4	Q96H15	378 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	NKX3-1	Q99801	234 aa	Predicted RBP	10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	RIMS4	Q9H426	269 aa	Predicted RBP	10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	KCNK15	Q9H427	330 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	ZNF665	Q9H7R5	613 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	ABCB10	Q9NRK6	738 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	HIF1AN	Q9NWT6	349 aa		10.08	□□□□□ -0.8
CTNS-205	ENST00000467663	TRAV20	A0A0B4J274	112 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663		A0A1W2PP11	408 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	SRRM5	B3KS81	715 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	SH2D1B	O14796	132 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	NXPH2	O95156	264 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	FSTL3	O95633	263 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	PTTG1	O95997	202 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	CSF1	P09603	554 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	TBP	P20226	339 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	GLRA1	P23415	457 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	CHAT	P28329	748 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	RCVRN	P35243	200 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	SRP14	P37108	136 aa	Known RBP	10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	NPBWR2	P48146	333 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	TMEM50B	P56557	158 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	GNG2	P59768	71 aa		10.07	□□□□□ -0.8
CTNS-205	ENST00000467663	MRPS15	P82914	257 aa	Known RBP	10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms