RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 TREM2Q9NZC2 230 aa12.42□□□□□ -0.42
DDX56-208ENST00000467318 GHRLQ9UBU3 117 aa12.42□□□□□ -0.42
DDX56-208ENST00000467318 U3KQ87 197 aa12.42□□□□□ -0.42
DDX56-208ENST00000467318 TRAV18A0A075B6X5 111 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 TMEM178BH3BS89 294 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 SYNGR1O43759 233 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 RHBDL1O75783 438 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 SLC22A5O76082 557 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 FSTL3O95633 263 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 PLATP00750 562 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 HTR2CP28335 458 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 DSCR9P59020 149 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 ZNF626Q68DY1 528 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 ASCL4Q6XD76 172 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 RNF144BQ7Z419 303 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 Q8IYB0 196 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 BEST4Q8NFU0 473 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 OR2T35Q8NGX2 323 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 ANGPTL6Q8NI99 470 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 LRRC29Q8WV35 223 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 PCDHB16Q9NRJ7 776 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 MGAT4CQ9UBM8 478 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 SLC23A1Q9UHI7 598 aa12.41□□□□□ -0.42
DDX56-208ENST00000467318 SETXQ7Z333 2677 aaKnown RBP12.4□□□□□ -0.42
DDX56-208ENST00000467318 LINC00862A6NCI5 91 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 SRRM5B3KS81 715 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 LYNX1G3V0Z9 82 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 TRAPPC2LH3BP13 241 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 NDUFS8O00217 210 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 SPRY1O43609 319 aaPredicted RBP12.4□□□□□ -0.42
DDX56-208ENST00000467318 TSC22D2O75157 780 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 MELTFP08582 738 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 PGA5P0DJD9 388 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 LYNX1P0DP58 116 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 OR3A4PP47883 348 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 PDLIM4P50479 330 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 DHODHQ02127 395 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 PRSS57Q6UWY2 283 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 TGIF2LYQ8IUE0 185 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 GCSAMQ8N6F7 178 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 POC1AQ8NBT0 407 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 UXS1Q8NBZ7 420 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 ZNF680Q8NEM1 530 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 TIMD4Q96H15 378 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 TMPRSS13Q9BYE2 586 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 ALX4Q9H161 411 aaPredicted RBP12.4□□□□□ -0.42
DDX56-208ENST00000467318 ATG5Q9H1Y0 275 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 RASL12Q9NYN1 266 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 MTCH1Q9NZJ7 389 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 FLVCR2Q9UPI3 526 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 NAV2Q8IVL1 2488 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 PDZD2O15018 2839 aa12.4□□□□□ -0.42
DDX56-208ENST00000467318 TANC2Q9HCD6 1990 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 TMEM272A0A1B0GTI8 110 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 CYSRT1A8MQ03 144 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 SCGNO76038 276 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 RGS11O94810 467 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 OR2A4O95047 310 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 CYB5R3P00387 301 aaPredicted RBP12.39□□□□□ -0.43
DDX56-208ENST00000467318 UBBP0CG47 229 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 RAB6AP20340 208 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 GLRA1P23415 457 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 OR3A3P47888 321 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 TAS2R19P59542 299 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 ERVK11-1P61568 191 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 LGALSLQ3ZCW2 172 aaPredicted RBP12.39□□□□□ -0.43
DDX56-208ENST00000467318 ESCO2Q56NI9 601 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 AWAT2Q6E213 333 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 CLEC2AQ6UVW9 174 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 ZNF525Q8N782 197 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 TMEM229BQ8NBD8 167 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 OR11H4Q8NGC9 324 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 OR4D6Q8NGJ1 314 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 CCDC107Q8WV48 283 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 SLC25A28Q96A46 364 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 OR2A7Q96R45 310 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 NRIP2Q9BQI9 281 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 METTL9Q9H1A3 318 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 BEX1Q9HBH7 125 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 IL36GQ9NZH8 169 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 ZNF69Q9UC07 566 aa12.39□□□□□ -0.43
DDX56-208ENST00000467318 MRPS28Q9Y2Q9 187 aaKnown RBP12.39□□□□□ -0.43
DDX56-208ENST00000467318 ANKRD17O75179 2603 aaKnown RBP12.39□□□□□ -0.43
DDX56-208ENST00000467318 PPIAL4EA0A075B759 164 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 PPIAL4DF5H284 164 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 ANGPTL7O43827 346 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 KDM4BO94953 1096 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 PPIAL4FP0DN26 164 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 GTF2F2P13984 249 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 RAB14P61106 215 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 RSU1Q15404 277 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 RAB12Q6IQ22 244 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 GLIPR1L1Q6UWM5 242 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 Q6ZTK2 550 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 C1QL2Q7Z5L3 287 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 GPX8Q8TED1 209 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 FAM168AQ92567 244 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 RAB1CQ92928 201 aa12.38□□□□□ -0.43
DDX56-208ENST00000467318 GCDHQ92947 438 aaPredicted RBP12.38□□□□□ -0.43
DDX56-208ENST00000467318 SLAMF9Q96A28 289 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms