RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 LINC00303Q3SY05 128 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 DNLZQ5SXM8 178 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 KHDRBS2Q5VWX1 349 aaKnown RBP2.33□□□□□ -2.04
VPS13A-209ENST00000467124 TMEM144Q7Z5S9 345 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 MRPL52Q86TS9 123 aaKnown RBP2.33□□□□□ -2.04
VPS13A-209ENST00000467124 ZFP62Q8NB50 900 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-209ENST00000467124 SCGB1C1Q8TD33 95 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 DDIT4LQ96D03 193 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 ZNF514Q96K75 400 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-209ENST00000467124 FAM210AQ96ND0 272 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 C7orf50Q9BRJ6 194 aaKnown RBP2.33□□□□□ -2.04
VPS13A-209ENST00000467124 SEC22CQ9BRL7 303 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 FADS3Q9Y5Q0 445 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 DYSFO75923 2080 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 NRCAMQ92823 1304 aa2.33□□□□□ -2.04
VPS13A-209ENST00000467124 KIF26AQ9ULI4 1882 aaPredicted RBP2.33□□□□□ -2.04
VPS13A-209ENST00000467124 PGPA6NDG6 321 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 I3L4J1 428 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 GOLGA8RI6L899 631 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 AQP9O43315 295 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 ATP6V1G2O95670 118 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 IGHV1-46P01743 117 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 TRGV3P03979 118 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 SNRPAP09012 282 aaKnown RBP2.32□□□□□ -2.04
VPS13A-209ENST00000467124 PVALBP20472 110 aaPredicted RBP2.32□□□□□ -2.04
VPS13A-209ENST00000467124 MPV17P39210 176 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 IDH2P48735 452 aaKnown RBP2.32□□□□□ -2.04
VPS13A-209ENST00000467124 FAM53BQ14153 422 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 CLEC12AQ5QGZ9 265 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 IGFL3Q6UXB1 125 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 FAM183BPQ6ZVS7 135 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 FAM19A3Q7Z5A8 133 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 DPPA2Q7Z7J5 298 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 FUNDC1Q8IVP5 155 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 FAM9CQ8IZT9 166 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 FAM45AQ8TCE6 357 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 TSSK6Q9BXA6 273 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 FAM60AQ9NP50 221 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 ASCL3Q9NQ33 180 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 C14orf166Q9Y224 244 aaKnown RBP2.32□□□□□ -2.04
VPS13A-209ENST00000467124 POMPQ9Y244 141 aa2.32□□□□□ -2.04
VPS13A-209ENST00000467124 TRAV8-2A0A0B4J237 113 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 A0A1W2PQ67 120 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 MYBPHLA2RUH7 354 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 FABP12A6NFH5 140 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 EFCAB9A8MZ26 197 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 C8orf87E5RJ46 101 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 GPR171O14626 319 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 YEATS4O95619 227 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 CA2P00918 260 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 CECR9P0C854 216 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 PET100P0DJ07 73 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 SLC2A1P11166 492 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 PSMB9P28065 219 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 CD40LGP29965 261 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 TGFBR2P37173 567 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 RHOAP61586 193 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 TPM4P67936 248 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 RBM48Q5RL73 367 aaKnown RBP2.31□□□□□ -2.04
VPS13A-209ENST00000467124 LAIR2Q6ISS4 152 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 CASP12Q6UXS9 341 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 BLIDQ8IZY5 108 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 APCDD1LQ8NCL9 501 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 OR2M3Q8NG83 312 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 OR7G1Q8NGA0 311 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 DYNC2LI1Q8TCX1 351 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 DDI1Q8WTU0 396 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 PHF10Q8WUB8 498 aaKnown RBP2.31□□□□□ -2.04
VPS13A-209ENST00000467124 DNAJB3Q8WWF6 145 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 RORBQ92753 470 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 MAL2Q969L2 176 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 LRRC45Q96CN5 670 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 PEBP4Q96S96 227 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 SCRT1Q9BWW7 348 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 IL37Q9NZH6 218 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 TBL2Q9Y4P3 447 aaKnown RBP2.31□□□□□ -2.04
VPS13A-209ENST00000467124 BRWD3Q6RI45 1802 aa2.31□□□□□ -2.04
VPS13A-209ENST00000467124 MIA3Q5JRA6 1907 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 IGHV3OR16-8A0A075B7F1 116 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 F8VZ95 297 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.3□□□□□ -2.04
VPS13A-209ENST00000467124 RTL8CO15255 209 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 CRXO43186 299 aaPredicted RBP2.3□□□□□ -2.04
VPS13A-209ENST00000467124 SLC37A4O43826 429 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 CDK14O94921 469 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 RAB36O95755 333 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 IGLV7-43P04211 117 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 TPM3P06753 285 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 PYCR1P32322 319 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 CRATP43155 626 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 CBX5P45973 191 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 SULT1A2P50226 295 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 NUDT2P50583 147 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 ZNF83P51522 516 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 KRTAP13-3Q3SY46 172 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 LAMTOR1Q6IAA8 161 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 GLYATQ6IB77 296 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 C16orf47Q6ZP98 133 aaPredicted RBP2.3□□□□□ -2.04
VPS13A-209ENST00000467124 TMEM136Q6ZRR5 245 aa2.3□□□□□ -2.04
VPS13A-209ENST00000467124 CLEC20AQ6ZU45 233 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms