RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 CEP295Q9C0D2 2601 aa11.53□□□□□ -0.56
UBE4B-206ENST00000466379 ACACAQ13085 2346 aa11.53□□□□□ -0.56
UBE4B-206ENST00000466379 LRP5LA4QPB2 252 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 MLNRO43193 412 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 CTSDP07339 412 aaPredicted RBP11.52□□□□□ -0.56
UBE4B-206ENST00000466379 SCTP09683 121 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 ZNF728P0DKX0 622 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 AADACP22760 399 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 PMELP40967 661 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 C11orf87Q6NUJ2 197 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 GSG1LQ6UXU4 331 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 ZNF546Q86UE3 836 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 Q8NA96 180 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 COQ8AQ8NI60 647 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 FAM57AQ8TBR7 257 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 Q9N2K0 584 aa11.52□□□□□ -0.56
UBE4B-206ENST00000466379 PURGQ9UJV8 347 aaKnown RBP11.52□□□□□ -0.56
UBE4B-206ENST00000466379 TEX13DA0A0J9YY54 714 aaPredicted RBP11.52□□□□□ -0.57
UBE4B-206ENST00000466379 TIMM8AO60220 97 aaPredicted RBP11.52□□□□□ -0.57
UBE4B-206ENST00000466379 NAPSAO96009 420 aa11.52□□□□□ -0.57
UBE4B-206ENST00000466379 HOXB5P09067 269 aa11.52□□□□□ -0.57
UBE4B-206ENST00000466379 ZNF44P15621 663 aa11.52□□□□□ -0.57
UBE4B-206ENST00000466379 PIGPP57054 158 aa11.52□□□□□ -0.57
UBE4B-206ENST00000466379 PHLDA2Q53GA4 152 aa11.52□□□□□ -0.57
UBE4B-206ENST00000466379 BEX5Q5H9J7 111 aa11.52□□□□□ -0.57
UBE4B-206ENST00000466379 C20orf204Q6ZNR8 217 aa11.52□□□□□ -0.57
UBE4B-206ENST00000466379 OR5T2Q8NGG2 359 aa11.52□□□□□ -0.57
UBE4B-206ENST00000466379 SLX1AQ9BQ83 275 aa11.52□□□□□ -0.57
UBE4B-206ENST00000466379 DECR2Q9NUI1 292 aa11.52□□□□□ -0.57
UBE4B-206ENST00000466379 SIRPB1O00241 398 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 BET1O15155 118 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 FGL1Q08830 312 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 KRTCAP3Q53RY4 240 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 FAM76BQ5HYJ3 339 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 ZNF324BQ6AW86 544 aaPredicted RBP11.51□□□□□ -0.57
UBE4B-206ENST00000466379 ZNF826PQ6ZT77 177 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 OR11L1Q8NGX0 322 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 PLK3Q9H4B4 646 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 METTL8Q9H825 291 aaKnown RBP11.51□□□□□ -0.57
UBE4B-206ENST00000466379 MSL2Q9HCI7 577 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 TMEM100Q9NV29 134 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 SH3BGRL2Q9UJC5 107 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 CRYM-AS1A6NIL9 109 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 M0R1B8 84 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 DEGS1O15121 323 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 IFNA2P01563 188 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 GLI4P10075 376 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 RPA2P15927 270 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 ECI1P42126 302 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 GLP1RP43220 463 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 IL13RA2Q14627 380 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 SP6Q3SY56 376 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 PRR30Q53SZ7 412 aaPredicted RBP11.51□□□□□ -0.57
UBE4B-206ENST00000466379 Q6P435 159 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 C16orf54Q6UWD8 224 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 Q6ZR03 302 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 SGPP2Q8IWX5 399 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 OR8G5Q8NG78 346 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 MRPL30Q8TCC3 161 aaKnown RBP11.51□□□□□ -0.57
UBE4B-206ENST00000466379 OR10C1Q96KK4 312 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 AMDHD2Q9Y303 409 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 SHANK1Q9Y566 2161 aa11.51□□□□□ -0.57
UBE4B-206ENST00000466379 TRAV39A0A0B4J263 110 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 IFNA7P01567 189 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 CRHP06850 196 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 C4BPBP20851 252 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 BMP5P22003 454 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 S100A1P23297 94 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 TIMP3P35625 211 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 TDGF1P3P51864 188 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 HERPUD1Q15011 391 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 ABCA11PQ4W5N1 156 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 PRAMEF6Q5VXH4 476 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 MOB3AQ96BX8 217 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 RAB18Q9NP72 206 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 MBD2Q9UBB5 411 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 UBQLN2Q9UHD9 624 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 PIEZO2Q9H5I5 2752 aa11.5□□□□□ -0.57
UBE4B-206ENST00000466379 HEATR1Q9H583 2144 aaKnown RBP11.5□□□□□ -0.57
UBE4B-206ENST00000466379 A0A0B4J2A0 478 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 PRSS44E7EML9 344 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 K7ENP7 123 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 RP2O75695 350 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 NXPH2O95156 264 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 CEBPDP49716 269 aaPredicted RBP11.49□□□□□ -0.57
UBE4B-206ENST00000466379 ERVK11-1P61568 191 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 NAAAQ02083 359 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 MSMPQ1L6U9 139 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 LINC00596Q86U02 117 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 GTF3AQ92664 365 aaKnown RBP11.49□□□□□ -0.57
UBE4B-206ENST00000466379 SHPKQ9UHJ6 478 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 TNFSF18Q9UNG2 199 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 POLDIP2Q9Y2S7 368 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 IGKV1-6A0A0C4DH72 117 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 WNT9BO14905 357 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 OR2H2O95918 312 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 PPYP01298 95 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 PGA5P0DJD9 388 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 SLC25A4P12235 298 aa11.49□□□□□ -0.57
UBE4B-206ENST00000466379 RCC1P18754 421 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms