RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 C10orf128Q5T292 105 aa17.11■□□□□ 0.33
SDF4-205ENST00000465727 C17orf82Q86X59 251 aaPredicted RBP17.11■□□□□ 0.33
SDF4-205ENST00000465727 H1FOOQ8IZA3 346 aaPredicted RBP17.11■□□□□ 0.33
SDF4-205ENST00000465727 LURAP1Q96LR2 239 aa17.11■□□□□ 0.33
SDF4-205ENST00000465727 CTDSP1Q9GZU7 261 aa17.11■□□□□ 0.33
SDF4-205ENST00000465727 PRO1933Q9H354 126 aa17.11■□□□□ 0.33
SDF4-205ENST00000465727 IGFLR1Q9H665 355 aa17.11■□□□□ 0.33
SDF4-205ENST00000465727 PLSCR2Q9NRY7 297 aa17.11■□□□□ 0.33
SDF4-205ENST00000465727 GLRX2Q9NS18 164 aa17.11■□□□□ 0.33
SDF4-205ENST00000465727 M0R135 149 aa17.1■□□□□ 0.33
SDF4-205ENST00000465727 SSSCA1O60232 199 aa17.1■□□□□ 0.33
SDF4-205ENST00000465727 ZNF205O95201 554 aa17.1■□□□□ 0.33
SDF4-205ENST00000465727 CA3P07451 260 aa17.1■□□□□ 0.33
SDF4-205ENST00000465727 DYNLT3P51808 116 aa17.1■□□□□ 0.33
SDF4-205ENST00000465727 TAS2R30P59541 319 aa17.1■□□□□ 0.33
SDF4-205ENST00000465727 CHAF1BQ13112 559 aa17.1■□□□□ 0.33
SDF4-205ENST00000465727 FOXL2NBQ6ZUU3 175 aa17.1■□□□□ 0.33
SDF4-205ENST00000465727 ZNF695Q8IW36 515 aa17.1■□□□□ 0.33
SDF4-205ENST00000465727 ZNF799Q96GE5 643 aa17.1■□□□□ 0.33
SDF4-205ENST00000465727 GPR173Q9NS66 373 aa17.1■□□□□ 0.33
SDF4-205ENST00000465727 CISD1Q9NZ45 108 aaKnown RBP17.1■□□□□ 0.33
SDF4-205ENST00000465727 A0A1W2PPC4 97 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 ZNF814B7Z6K7 855 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 ONECUT2O95948 504 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 PPYP01298 95 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 ENDOGQ14249 297 aaKnown RBP17.09■□□□□ 0.33
SDF4-205ENST00000465727 FAM90A2PQ658T7 463 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 DMRTC2Q8IXT2 367 aaPredicted RBP17.09■□□□□ 0.33
SDF4-205ENST00000465727 BEND2Q8NDZ0 799 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 SPTSSAQ969W0 71 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 ATP5SQ99766 215 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 ACTR3CQ9C0K3 210 aaPredicted RBP17.09■□□□□ 0.33
SDF4-205ENST00000465727 CDH20Q9HBT6 801 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 CA14Q9ULX7 337 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 MMP17Q9ULZ9 603 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 A0A087WZY1 265 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 A0A1W2PNR3 127 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 ANGPTL7O43827 346 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 AADACP22760 399 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 IL24Q13007 206 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 TMEM211Q6ICI0 200 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 FIP1L1Q6UN15 594 aaKnown RBP17.09■□□□□ 0.33
SDF4-205ENST00000465727 UNQ6494/PRO21346Q6UXR6 183 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 LHFPL2Q6ZUX7 228 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 DTX1Q86Y01 620 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 IL22RA1Q8N6P7 574 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 UBE2J1Q9Y385 318 aaPredicted RBP17.09■□□□□ 0.33
SDF4-205ENST00000465727 MTCH2Q9Y6C9 303 aa17.09■□□□□ 0.33
SDF4-205ENST00000465727 A8MWP6 167 aa17.08■□□□□ 0.33
SDF4-205ENST00000465727 DFFBO76075 338 aa17.08■□□□□ 0.33
SDF4-205ENST00000465727 RSPO1Q2MKA7 263 aaPredicted RBP17.08■□□□□ 0.33
SDF4-205ENST00000465727 CPEB2Q7Z5Q1 589 aaKnown RBP17.08■□□□□ 0.33
SDF4-205ENST00000465727 LMX1AQ8TE12 382 aa17.08■□□□□ 0.33
SDF4-205ENST00000465727 P2RX4Q99571 388 aa17.08■□□□□ 0.33
SDF4-205ENST00000465727 TGIF2Q9GZN2 237 aa17.08■□□□□ 0.33
SDF4-205ENST00000465727 IL36GQ9NZH8 169 aa17.08■□□□□ 0.33
SDF4-205ENST00000465727 SPRY1O43609 319 aaPredicted RBP17.08■□□□□ 0.32
SDF4-205ENST00000465727 FUT3P21217 361 aa17.08■□□□□ 0.32
SDF4-205ENST00000465727 RAB11AP62491 216 aa17.08■□□□□ 0.32
SDF4-205ENST00000465727 ID3Q02535 119 aa17.08■□□□□ 0.32
SDF4-205ENST00000465727 SHBQ15464 509 aa17.08■□□□□ 0.32
SDF4-205ENST00000465727 C1orf189Q5VU69 101 aa17.08■□□□□ 0.32
SDF4-205ENST00000465727 OSR2Q8N2R0 312 aa17.08■□□□□ 0.32
SDF4-205ENST00000465727 SUMF1Q8NBK3 374 aa17.08■□□□□ 0.32
SDF4-205ENST00000465727 SMOC1Q9H4F8 434 aa17.08■□□□□ 0.32
SDF4-205ENST00000465727 CALHM2Q9HA72 323 aa17.08■□□□□ 0.32
SDF4-205ENST00000465727 CDH23Q9H251 3354 aa17.07■□□□□ 0.32
SDF4-205ENST00000465727 IGHV3-20A0A0C4DH32 117 aa17.07■□□□□ 0.32
SDF4-205ENST00000465727 CLDN17P56750 224 aa17.07■□□□□ 0.32
SDF4-205ENST00000465727 WDR5BQ86VZ2 330 aa17.07■□□□□ 0.32
SDF4-205ENST00000465727 ODF3L1Q8IXM7 274 aa17.07■□□□□ 0.32
SDF4-205ENST00000465727 SELENOHQ8IZQ5 122 aaKnown RBP17.07■□□□□ 0.32
SDF4-205ENST00000465727 NFAM1Q8NET5 270 aaPredicted RBP17.07■□□□□ 0.32
SDF4-205ENST00000465727 THAP3Q8WTV1 239 aaPredicted RBP17.07■□□□□ 0.32
SDF4-205ENST00000465727 SNX22Q96L94 193 aa17.07■□□□□ 0.32
SDF4-205ENST00000465727 CABLES2Q9BTV7 478 aa17.07■□□□□ 0.32
SDF4-205ENST00000465727 NDUFAF3Q9BU61 184 aa17.07■□□□□ 0.32
SDF4-205ENST00000465727 GPR87Q9BY21 358 aa17.07■□□□□ 0.32
SDF4-205ENST00000465727 PIAS3Q9Y6X2 628 aa17.07■□□□□ 0.32
SDF4-205ENST00000465727 FER1L5A0AVI2 2057 aa17.07■□□□□ 0.32
SDF4-205ENST00000465727 PDCD6O75340 191 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 CST7O76096 145 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 PGA5P0DJD9 388 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 BCL2P10415 239 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 EPHA1P21709 976 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 RUNX1Q01196 453 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 MALLQ13021 153 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 ZNF385CQ66K41 422 aaPredicted RBP17.06■□□□□ 0.32
SDF4-205ENST00000465727 OR10A7Q8NGE5 316 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 NABP1Q96AH0 204 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 MISP3Q96FF7 219 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 BORCS8Q96FH0 119 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 POM121Q96HA1 1249 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 MTIF3Q9H2K0 278 aaKnown RBP17.06■□□□□ 0.32
SDF4-205ENST00000465727 SRD5A3Q9H8P0 318 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 SDF2L1Q9HCN8 221 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 ZNF581Q9P0T4 197 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 OPN1LWP04000 364 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 GZMBP10144 247 aa17.06■□□□□ 0.32
SDF4-205ENST00000465727 VDAC1P21796 283 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms