RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 CXCL3P19876 107 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 GATA4P43694 442 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 ACTBL2Q562R1 376 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 RNASE10Q5GAN6 216 aaKnown RBP14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 BPIFB2Q8N4F0 458 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 SCCPDHQ8NBX0 429 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 PXT1Q8NFP0 134 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 CCDC107Q8WV48 283 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 NUDCD2Q8WVJ2 157 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 TINAGL1Q9GZM7 467 aaPredicted RBP14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 EGLN1Q9GZT9 426 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 METTL9Q9H1A3 318 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 TLNRD1Q9H1K6 362 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 SAP30LQ9HAJ7 183 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 BEX1Q9HBH7 125 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 GCM1Q9NP62 436 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 UFSP2Q9NUQ7 469 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 IL36GQ9NZH8 169 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 ZNF222Q9UK12 451 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 ITGB1BP2Q9UKP3 347 aa14.27□□□□□ -0.12
EXOSC3-203ENST00000465229 SERPINE3A8MV23 424 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 CDIPTO14735 213 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 FABP7O15540 132 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 PMELP40967 661 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 IFITM2Q01629 132 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 TESK1Q15569 626 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 HAGHLQ6PII5 290 aaPredicted RBP14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 IDO2Q6ZQW0 420 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 OR5D18Q8NGL1 313 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 MRPS24Q96EL2 167 aaKnown RBP14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 ARHGAP5-AS1Q96IT6 56 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 NOTCH2Q04721 2471 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 ASH1LQ9NR48 2969 aaKnown RBP14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 UBE2QL1A1L167 161 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 M0QYG6 137 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 NDUFS7O75251 213 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 TMEM225BP0DP42 221 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 VSIG10L2P0DP72 767 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 TNFRSF1AP19438 455 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 RBMXP38159 391 aaKnown RBP14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 PDZK1IP1Q13113 114 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 ZNF826PQ6ZT77 177 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 MOGAT3Q86VF5 341 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 NEU4Q8WWR8 484 aaPredicted RBP14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 ST8SIA4Q92187 359 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 Q96M66 194 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 SEC22CQ9BRL7 303 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 ZNF436Q9C0F3 470 aaPredicted RBP14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 PCDHB16Q9NRJ7 776 aa14.26□□□□□ -0.13
EXOSC3-203ENST00000465229 A6NLC8 198 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 AKR7A2O43488 359 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 SPRY1O43609 319 aaPredicted RBP14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 RHBDL1O75783 438 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 PLATP00750 562 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 RLN1P04808 185 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 SERPINA2P20848 420 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 TGIF2LYQ8IUE0 185 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 ZDHHC22Q8N966 263 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 ZSCAN4Q8NAM6 433 aaPredicted RBP14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 ERGIC1Q969X5 290 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 SLC6A7Q99884 636 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 PKIBQ9C010 78 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 SLA2Q9H6Q3 261 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 DLL4Q9NR61 685 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 TREM2Q9NZC2 230 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 PPP1R3CQ9UQK1 317 aa14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 CHD3Q12873 2000 aaKnown RBP14.25□□□□□ -0.13
EXOSC3-203ENST00000465229 TMEM82A0PJX8 343 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 J3QT63 122 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 SYNGR1O43759 233 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 LY6HO94772 140 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 BLVRBP30043 206 aaPredicted RBP14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 RSU1Q15404 277 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 VAX1Q5SQQ9 334 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 WDR82Q6UXN9 313 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 SLC25A26Q70HW3 274 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 GVQW1Q8N7I0 195 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 OR4S1Q8NGB4 309 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 OR13C8Q8NGS7 320 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 PECRQ9BY49 303 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 FN3KRPQ9HA64 309 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 ZNF701Q9NV72 531 aaPredicted RBP14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 C1orf123Q9NWV4 160 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 ZNF69Q9UC07 566 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 HSF4Q9ULV5 492 aa14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 ANKRD17O75179 2603 aaKnown RBP14.24□□□□□ -0.13
EXOSC3-203ENST00000465229 IGKV1-12A0A0C4DH73 117 aa14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 ANGPTL7O43827 346 aa14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 OR2A4O95047 310 aa14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 F12P00748 615 aaPredicted RBP14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 IGKV1D-12P01611 117 aa14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 CSTBP04080 98 aaKnown RBP14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 FCER2P06734 321 aa14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 GIPP09681 153 aaPredicted RBP14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 COL8A2P25067 703 aa14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 EFNA4P52798 201 aa14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 IL24Q13007 206 aa14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 OR10K1Q8NGX5 313 aa14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 OR51F2Q8NH61 342 aa14.23□□□□□ -0.13
EXOSC3-203ENST00000465229 Q8TCH9 128 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms