RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 SNRNP70P08621 437 aaKnown RBP11.53□□□□□ -0.56
MCF2L-220ENST00000464800 CALCBP10092 127 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 GLIPR1P48060 266 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 ATP1B3P54709 279 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 AESQ08117 197 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 CATSPERDQ86XM0 798 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 THNSL2Q86YJ6 484 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 YIPF7Q8N8F6 280 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 CCDC54Q8NEL0 328 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 OR56B4Q8NH76 319 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 TMEM163Q8TC26 289 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 RAX2Q96IS3 184 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 ASCL2Q99929 193 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 ADI1Q9BV57 179 aa11.53□□□□□ -0.56
MCF2L-220ENST00000464800 AMMECR1Q9Y4X0 333 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-220ENST00000464800 ODAMA1E959 279 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 FAM90A18PA6NE21 464 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 FAM90A16PA6NEW6 464 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 FAM90A20PA6NIJ5 464 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 FAM90A9PA6NNJ1 464 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 FAM90A12PA8MX19 464 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 FAM90A5PA8MXJ8 464 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 CCL24O00175 119 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 GYG2O15488 501 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 FGF16O43320 207 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 FAM90A15PP0C7V4 464 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 FAM90A13PP0C7W8 464 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 FAM90A14PP0C7W9 464 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 FAM90A24PP0C7X0 464 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 TMEM11P17152 192 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 EPHA2P29317 976 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 HES1Q14469 280 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 C9orf66Q5T8R8 295 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 SSX6Q7RTT6 188 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 SLC35E3Q7Z769 313 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 FOXRED2Q8IWF2 684 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 DNAAF1Q8NEP3 725 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 OR5M8Q8NGP6 311 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 OR9G1Q8NH87 305 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 MUC7Q8TAX7 377 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 PP6455Q8WZ26 134 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 UTP4Q969X6 686 aaKnown RBP11.52□□□□□ -0.57
MCF2L-220ENST00000464800 IL4I1Q96RQ9 567 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 TBX5Q99593 518 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 HMG20AQ9NP66 347 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 KRT84Q9NSB2 600 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 LINC00527Q9UJ94 153 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 POMPQ9Y244 141 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 GSTK1Q9Y2Q3 226 aa11.52□□□□□ -0.57
MCF2L-220ENST00000464800 LOC107986453A0A1B0GWG9 222 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 ZNF729A6NN14 1252 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-220ENST00000464800 ZAR1LA6NP61 321 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 NFYBP25208 207 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 ECI1P42126 302 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 MTCP1P56278 107 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 DNAL1Q4LDG9 190 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 KRBOX4Q5JUW0 171 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 CASC10Q5T4H9 136 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 C12orf73Q69YU5 71 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 GID4Q8IVV7 300 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 STPG2Q8N412 459 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 DRAM1Q8N682 238 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 Q8NFD4 153 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 OR8U1Q8NH10 309 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 C10orf35Q96D05 121 aa11.51□□□□□ -0.57
MCF2L-220ENST00000464800 A0A1W2PPI3 338 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 A0A1W2PQL4 384 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-220ENST00000464800 METTL15A6NJ78 407 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 IGHG2P01859 326 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 CSN2P05814 226 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 ZNF44P15621 663 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 DEFB136Q30KP8 78 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 UTF1Q5T230 341 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 TEX38Q6PEX7 206 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 LHFPL2Q6ZUX7 228 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 COQ2Q96H96 371 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 HRASLS5Q96KN8 279 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 COMMD4Q9H0A8 199 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 ING3Q9NXR8 418 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 OR6C3Q9NZP0 311 aa11.5□□□□□ -0.57
MCF2L-220ENST00000464800 WARS2Q9UGM6 360 aaKnown RBP11.5□□□□□ -0.57
MCF2L-220ENST00000464800 SEC14L6B5MCN3 397 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 G3V2T6 193 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 OR2T7P0C7T2 308 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 UBCP0CG48 685 aaKnown RBP11.49□□□□□ -0.57
MCF2L-220ENST00000464800 PRKACBP22694 351 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 CHATP28329 748 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 SCN1BQ07699 218 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 BNIP1Q12981 228 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 PDZK1IP1Q13113 114 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 MADCAM1Q13477 382 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 HNF4GQ14541 408 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 ATXN7L3Q14CW9 347 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-220ENST00000464800 C17orf58Q2M2W7 97 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 CXorf66Q5JRM2 361 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-220ENST00000464800 CHST4Q8NCG5 386 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 SLC7A6OSQ96CW6 309 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-220ENST00000464800 KIRREL1Q96J84 757 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 DCLRE1BQ9H816 532 aa11.49□□□□□ -0.57
MCF2L-220ENST00000464800 IGKV1-9A0A0C4DH69 117 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms