RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ENPP5Q9UJA9 477 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 PLCE1Q9P212 2302 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 A0A0U1RQV5 110 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 CD300LBA8K4G0 201 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 B4DSR2 109 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 CCRL2O00421 344 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 SYT7O43581 403 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 IGKV3-20P01619 116 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 TFF1P04155 84 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 SLC2A2P11168 524 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ACHEP22303 614 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 GABRA5P31644 462 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 MMP15P51511 669 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 CCR9P51686 369 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 MXD1Q05195 221 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ECH1Q13011 328 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 SCGB2A2Q13296 93 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 CCDC58Q4VC31 144 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 GPR141Q7Z602 305 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 CEACAM19Q7Z692 300 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 DPPA2Q7Z7J5 298 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 COMMD2Q86X83 199 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 CCDC36Q8IYA8 594 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 OR10AD1Q8NGE0 317 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 TRMT10AQ8TBZ6 339 aaKnown RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 FCGR1BQ92637 280 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 SPTSSAQ969W0 71 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 TMEM106AQ96A25 262 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 MRPL24Q96A35 216 aaKnown RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 RFT1Q96AA3 541 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 APOBEC3DQ96AK3 386 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 C12orf43Q96C57 262 aaKnown RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ISOC1Q96CN7 298 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 SEH1LQ96EE3 360 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 C1QTNF4Q9BXJ3 329 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 SLITRK2Q9H156 845 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 EXOSC4Q9NPD3 245 aaKnown RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ESM1Q9NQ30 184 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 CA10Q9NS85 328 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 CHCHD3Q9NX63 227 aaKnown RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 PURGQ9UJV8 347 aaKnown RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 STUB1Q9UNE7 303 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 CACNG2Q9Y698 323 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 IGLV3-9A0A075B6K5 115 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 IGKV1-12A0A0C4DH73 117 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 A0A1B0GVI7 797 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 TRDV1A0A1B0GX56 115 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 A0A1W2PP11 408 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 TMEM212A6NML5 194 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF850A8MQ14 1090 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF879B4DU55 563 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 F5H5P2 479 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 F8VVB4 439 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 F8VWA3 439 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 AIREO43918 545 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 DHRS3O75911 302 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 GAS8-AS1O95177 125 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 IGKV1D-12P01611 117 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 CRYAAP02489 173 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 ISG15P05161 165 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 UCHL1P09936 223 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 OR4A8P0C604 315 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 OCM2P0CE71 109 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 UBCP0CG48 685 aaKnown RBP2.98□□□□□ -1.93
SCFD1-204ENST00000463622 CALCBP10092 127 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 CA6P23280 308 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 CALRP27797 417 aaKnown RBP2.98□□□□□ -1.93
SCFD1-204ENST00000463622 SDC2P34741 201 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 GLRXP35754 106 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 SERPINF1P36955 418 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 PMELP40967 661 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 CLDN12P56749 244 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 MAB21L1Q13394 359 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 MADCAM1Q13477 382 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 EFNB3Q15768 340 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 Q499Y3 187 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 FAM201AQ5SY85 155 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 PRAMEF6Q5VXH4 476 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 TMEM42Q69YG0 159 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 FBXW12Q6X9E4 464 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF826PQ6ZT77 177 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 MRPL21Q7Z2W9 205 aaKnown RBP2.98□□□□□ -1.93
SCFD1-204ENST00000463622 CALHM1Q8IU99 346 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 C11orf53Q8IXP5 236 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 NUP37Q8NFH4 326 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 OR5D18Q8NGL1 313 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 OR13C3Q8NGS6 347 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 TSEN15Q8WW01 171 aaKnown RBP2.98□□□□□ -1.93
SCFD1-204ENST00000463622 TMEM186Q96B77 213 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 HAVCR1Q96D42 359 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 C1orf147Q96MC9 270 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF488Q96MN9 340 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 TPK1Q9H3S4 243 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 PLK3Q9H4B4 646 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 MOB1AQ9H8S9 216 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF275Q9NSD4 429 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-204ENST00000463622 TREM2Q9NZC2 230 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 IL36RNQ9UBH0 155 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 POU2F3Q9UKI9 436 aa2.98□□□□□ -1.93
SCFD1-204ENST00000463622 HHLA2Q9UM44 414 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms