RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 SSX3Q99909 188 aa13.2□□□□□ -0.3
COL1A1-202ENST00000463440 SLITRK2Q9H156 845 aa13.2□□□□□ -0.3
COL1A1-202ENST00000463440 PPA2Q9H2U2 334 aa13.2□□□□□ -0.3
COL1A1-202ENST00000463440 FKBP14Q9NWM8 211 aa13.2□□□□□ -0.3
COL1A1-202ENST00000463440 SESN1Q9Y6P5 492 aa13.2□□□□□ -0.3
COL1A1-202ENST00000463440 PNMA8CA0A1B0GUJ8 204 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 CLPSL1A2RUU4 121 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 ERICH4A6NGS2 130 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 H3BUX3 64 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 SLC33A1O00400 549 aaPredicted RBP13.19□□□□□ -0.3
COL1A1-202ENST00000463440 CLPXO76031 633 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 CSN2P05814 226 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 TGFBR2P37173 567 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 IL13RA2Q14627 380 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 LRRC75BQ2VPJ9 315 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 C6orf141Q5SZD1 244 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 OLFML2AQ68BL7 652 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 ASCL4Q6XD76 172 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 NANOGP1Q8N7R0 232 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 OR11H6Q8NGC7 330 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 NRG4Q8WWG1 115 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 MYDGFQ969H8 173 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 FOXRED1Q96CU9 486 aaPredicted RBP13.19□□□□□ -0.3
COL1A1-202ENST00000463440 S100A13Q99584 98 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 METTL9Q9H1A3 318 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 VCX3BQ9H321 246 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 GAL3ST2Q9H3Q3 398 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 SCN3BQ9NY72 215 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 ING4Q9UNL4 249 aa13.19□□□□□ -0.3
COL1A1-202ENST00000463440 TBL2Q9Y4P3 447 aaKnown RBP13.19□□□□□ -0.3
COL1A1-202ENST00000463440 ODF3BA8MYP8 253 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 GPX5O75715 221 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 HTR3BO95264 441 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 CD1AP06126 327 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 CDK1P06493 297 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 IGFBP3P17936 291 aaPredicted RBP13.18□□□□□ -0.3
COL1A1-202ENST00000463440 CELP19835 753 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 OR3A4PP47883 348 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 GLIPR1P48060 266 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 RPS11P62280 158 aaKnown RBP eCLIP13.18□□□□□ -0.3
COL1A1-202ENST00000463440 AESQ08117 197 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 DYNC1I2Q13409 638 aaKnown RBP13.18□□□□□ -0.3
COL1A1-202ENST00000463440 KRBOX4Q5JUW0 171 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 ZNF626Q68DY1 528 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 OR51T1Q8NGJ9 327 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 OR10K1Q8NGX5 313 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 THRSPQ92748 146 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 CORO2AQ92828 525 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 ORAI1Q96D31 301 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 OR14A2Q96R54 314 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 MND1Q9BWT6 205 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 PCDHB16Q9NRJ7 776 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 PAK1IP1Q9NWT1 392 aaPredicted RBP13.18□□□□□ -0.3
COL1A1-202ENST00000463440 TAS2R3Q9NYW6 316 aa13.18□□□□□ -0.3
COL1A1-202ENST00000463440 ODAMA1E959 279 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 FAM90A8PA6NJQ4 464 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 PTGES3LE9PB15 166 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 CSTBP04080 98 aaKnown RBP13.17□□□□□ -0.3
COL1A1-202ENST00000463440 FSTP19883 344 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 BDH1Q02338 343 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 ATXN7L3Q14CW9 347 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-202ENST00000463440 PAN3Q58A45 887 aaKnown RBP13.17□□□□□ -0.3
COL1A1-202ENST00000463440 RNLSQ5VYX0 342 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 OR52W1Q6IF63 320 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 LHFPL4Q7Z7J7 247 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 Q8NFD4 153 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 MALSU1Q96EH3 234 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 ZNF184Q99676 751 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-202ENST00000463440 NKX3-1Q99801 234 aaPredicted RBP13.17□□□□□ -0.3
COL1A1-202ENST00000463440 TMEM133Q9H2Q1 129 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 ING3Q9NXR8 418 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 IL36GQ9NZH8 169 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 RNF114Q9Y508 228 aa13.17□□□□□ -0.3
COL1A1-202ENST00000463440 TRAV8-7A0A075B6U6 113 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 TRBV5-7A0A0A0MS05 114 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 IGHV2-26A0A0B4J1V2 119 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 H0YHG0 523 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 ZNF780AO75290 641 aaPredicted RBP13.16□□□□□ -0.3
COL1A1-202ENST00000463440 CDRT1O95170 752 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 LY6EQ16553 131 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 PIGYQ3MUY2 71 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 HEPN1Q6WQI6 88 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 Q6ZSV7 163 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 OSR2Q8N2R0 312 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 LINC01006Q8NI28 216 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 WFDC12Q8WWY7 111 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 COQ2Q96H96 371 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 CDCA4Q9BXL8 241 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 CLEC7AQ9BXN2 247 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 RAB18Q9NP72 206 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 OR6C3Q9NZP0 311 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 FOXJ3Q9UPW0 622 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 ST3GAL6Q9Y274 331 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 TPRKBQ9Y3C4 175 aa13.16□□□□□ -0.3
COL1A1-202ENST00000463440 TRAV24A0A0B4J272 114 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 A0A1W2PPK0 400 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 ZNF729A6NN14 1252 aaPredicted RBP13.15□□□□□ -0.3
COL1A1-202ENST00000463440 VGLL3A8MV65 326 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 HSPB6O14558 160 aa13.15□□□□□ -0.3
COL1A1-202ENST00000463440 TSPAN9O75954 239 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms