RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 POM121Q96HA1 1249 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 ARL6Q9H0F7 186 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 MSL2Q9HCI7 577 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 Q9N2K0 584 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 OBP2BQ9NPH6 170 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 PURGQ9UJV8 347 aaKnown RBP10.88□□□□□ -0.67
VAPB-203ENST00000463370 C14orf166Q9Y224 244 aaKnown RBP10.88□□□□□ -0.67
VAPB-203ENST00000463370 CTSDP07339 412 aaPredicted RBP10.88□□□□□ -0.67
VAPB-203ENST00000463370 GLI4P10075 376 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 AADACP22760 399 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 S100A11P31949 105 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 TIMP3P35625 211 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 ERVK11-1P61568 191 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 OR8G1Q15617 311 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 KRTCAP3Q53RY4 240 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 C6orf183Q5T699 404 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 Q6P435 159 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 ZNF826PQ6ZT77 177 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 ZNF546Q86UE3 836 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 OR8H3Q8N146 312 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 OR11L1Q8NGX0 322 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 OR10C1Q96KK4 312 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 MFFQ9GZY8 342 aa10.88□□□□□ -0.67
VAPB-203ENST00000463370 CLEC4MQ9H2X3 399 aaPredicted RBP10.88□□□□□ -0.67
VAPB-203ENST00000463370 IGKV1-6A0A0C4DH72 117 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 CRHP06850 196 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 ZNF728P0DKX0 622 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 CEACAM8P31997 349 aaPredicted RBP10.87□□□□□ -0.67
VAPB-203ENST00000463370 PIGPP57054 158 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 PHLDA2Q53GA4 152 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 C11orf87Q6NUJ2 197 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 OR8G5Q8NG78 346 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 MRPL30Q8TCC3 161 aaKnown RBP10.87□□□□□ -0.67
VAPB-203ENST00000463370 FAM210AQ96ND0 272 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 NRIP2Q9BQI9 281 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 KALRNO60229 2985 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 TRAV39A0A0B4J263 110 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 CRYM-AS1A6NIL9 109 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 BET1O15155 118 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 HOXB5P09067 269 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 FAM87AP0C7U9 286 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 PGA5P0DJD9 388 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 ZNF44P15621 663 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 RPA2P15927 270 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 RCC1P18754 421 aaPredicted RBP10.87□□□□□ -0.67
VAPB-203ENST00000463370 BMP5P22003 454 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 FAM27E3Q08E93 113 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 SP6Q3SY56 376 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 BEX5Q5H9J7 111 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 LRP11Q86VZ4 500 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 DOLPP1Q86YN1 238 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 C11orf53Q8IXP5 236 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 PIP4P2Q8N4L2 257 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 COQ8AQ8NI60 647 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 GTF3AQ92664 365 aaKnown RBP10.87□□□□□ -0.67
VAPB-203ENST00000463370 PLK3Q9H4B4 646 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 TMEM100Q9NV29 134 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 SH3BGRL2Q9UJC5 107 aa10.87□□□□□ -0.67
VAPB-203ENST00000463370 SIRPB1O00241 398 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 WNT9BO14905 357 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 IFNA2P01563 188 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 CEBPDP49716 269 aaPredicted RBP10.86□□□□□ -0.67
VAPB-203ENST00000463370 NAAAQ02083 359 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 IL13RA2Q14627 380 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 PRAMEF6Q5VXH4 476 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 GSG1LQ6UXU4 331 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 OR5T2Q8NGG2 359 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 MOB3AQ96BX8 217 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 MBD2Q9UBB5 411 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 TNFSF18Q9UNG2 199 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 MSRB2Q9Y3D2 182 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 SHANK1Q9Y566 2161 aa10.86□□□□□ -0.67
VAPB-203ENST00000463370 RPS10-NUDT3A0A1W2PQS6 291 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 RNF222A6NCQ9 220 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 PRSS44E7EML9 344 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 H0YIZ8 118 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 M0R1B8 84 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 DEGS1O15121 323 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 TIMM8AO60220 97 aaPredicted RBP10.85□□□□□ -0.67
VAPB-203ENST00000463370 OR2H2O95918 312 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 PPYP01298 95 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 TFF1P04155 84 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 ECI1P42126 302 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 Q6ZS49 121 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 RAB18Q9NP72 206 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 COMMD9Q9P000 198 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 AMDHD2Q9Y303 409 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 TLN1Q9Y490 2541 aaKnown RBP10.85□□□□□ -0.67
VAPB-203ENST00000463370 ESPL1Q14674 2120 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 SPTBN4Q9H254 2564 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 A0A0B4J2A0 478 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 TEX13DA0A0J9YY54 714 aaPredicted RBP10.85□□□□□ -0.67
VAPB-203ENST00000463370 SLC25A4P12235 298 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 KITLGP21583 273 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 FGL1Q08830 312 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 TIMM23BQ5SRD1 257 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 LINC00596Q86U02 117 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 SGPP2Q8IWX5 399 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 PLPPR1Q8TBJ4 325 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 GPHA2Q96T91 129 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms