RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 ERICH3Q5RHP9 1530 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 SCN4AP35499 1836 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 NRCAMQ92823 1304 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 NCOA2Q15596 1464 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 A0A1W2PRG6 482 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 PGPA6NDG6 321 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 GOLGA8KD6RF30 607 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 GOLGA8MH3BSY2 632 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 LIN7AO14910 233 aaPredicted RBP2.47□□□□□ -2.01
USH2A-203ENST00000463147 OR2A4O95047 310 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 KLHL2O95198 593 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 C1GALT1C1LP0DN25 315 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 COX5BP10606 129 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 SPNP16150 400 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 DLX6P56179 175 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 ZNF235Q14590 738 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 CCDC122Q5T0U0 273 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 FAM45BPQ6NSW5 357 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 DRAM2Q6UX65 266 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 FAM151BQ6UXP7 276 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 LINC00596Q86U02 117 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 ZIC4Q8N9L1 334 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 Q8N9L7 120 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 ACBD4Q8NC06 268 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 ATP6V1C2Q8NEY4 427 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 SLC26A10Q8NG04 563 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 OR5L1Q8NGL2 311 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 ANKRD7Q92527 254 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 L3HYPDHQ96EM0 354 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 OR2A7Q96R45 310 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 SDHCQ99643 169 aaPredicted RBP2.47□□□□□ -2.01
USH2A-203ENST00000463147 TBL1YQ9BQ87 522 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 DCUN1D5Q9BTE7 237 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 FAAP24Q9BTP7 215 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 LINC00574Q9H8X3 128 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 FBXO6Q9NRD1 293 aaPredicted RBP2.47□□□□□ -2.01
USH2A-203ENST00000463147 PLEKHJ1Q9NW61 149 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 OPN4Q9UHM6 478 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 PTPRKQ15262 1439 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 ADCY9O60503 1353 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 MAPKBP1O60336 1514 aa2.47□□□□□ -2.01
USH2A-203ENST00000463147 VIRMAQ69YN4 1812 aaKnown RBP2.47□□□□□ -2.01
USH2A-203ENST00000463147 SCN1AP35498 2009 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 NOS1P29475 1434 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 SETD5Q9C0A6 1442 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 RRBP1Q9P2E9 1410 aaKnown RBP2.46□□□□□ -2.02
USH2A-203ENST00000463147 TRAV8-3A0A0A6YYJ7 113 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 FAM183AA6NL82 134 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 CENPBD1B2RD01 187 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 SLC31A1O15431 190 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 CNMDO75829 334 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 CYB5R3P00387 301 aaPredicted RBP2.46□□□□□ -2.02
USH2A-203ENST00000463147 ASS1P00966 412 aaKnown RBP2.46□□□□□ -2.02
USH2A-203ENST00000463147 NTF3P20783 257 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 CCL23P55773 120 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 ELOCQ15369 112 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 KLHL12Q53G59 568 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 ZNF678Q5SXM1 525 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 NANOGP8Q6NSW7 305 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 ZNF773Q6PK81 442 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 DGAT2L6Q6ZPD8 337 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 SHISA6Q6ZSJ9 500 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 FAM19A3Q7Z5A8 133 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 UBALD2Q8IYN6 164 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 SLC35G3Q8N808 338 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 SPANXA2-OT1Q8N9U9 137 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 OR2Z1Q8NG97 314 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 TBL1XR1Q9BZK7 514 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 VCXQ9H320 206 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 TMEM38BQ9NVV0 291 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 CBY1Q9Y3M2 126 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 TRIOBPQ9H2D6 2365 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 DOCK9Q9BZ29 2069 aa2.46□□□□□ -2.02
USH2A-203ENST00000463147 CCDC88BA6NC98 1476 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 KIAA1107Q9UPP5 1409 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 IGHV1-3A0A0C4DH29 117 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 CENPVL3A0A0U1RRI6 287 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 EFCAB9A8MZ26 197 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 F5H768 121 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 UPK2O00526 184 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 UGT2B11O75310 529 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 VAMP5O95183 116 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 ATP6V1G2O95670 118 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 CECR9P0C854 216 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 SLC2A1P11166 492 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 PVALBP20472 110 aaPredicted RBP2.45□□□□□ -2.02
USH2A-203ENST00000463147 IMPA1P29218 277 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 TMEM241Q24JQ0 296 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 TBC1D28Q2M2D7 210 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 FAM162BQ5T6X4 162 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 FAM222AQ5U5X8 452 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 SDHAF4Q5VUM1 108 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 C10orf67Q8IYJ2 551 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 MUC15Q8N387 334 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 OR2M3Q8NG83 312 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 OR6K3Q8NGY3 331 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 FRZBQ92765 325 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 CLDN23Q96B33 292 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 GPR82Q96P67 336 aa2.45□□□□□ -2.02
USH2A-203ENST00000463147 PRSS27Q9BQR3 290 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms