RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 DUX4L5P0CJ88 424 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 DUX4L6P0CJ89 424 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 DUX4L7P0CJ90 424 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 SMIM18P0DKX4 95 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 CGB3P0DN86 165 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 CGB7P0DN87 165 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 IRF2P14316 349 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 RAB3AP20336 220 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 ERP29P30040 261 aaKnown RBP4.72□□□□□ -1.65
VPS36-202ENST00000462289 BDKRB2P30411 391 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 CD80P33681 288 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 PTGFRP43088 359 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 NPBWR2P48146 333 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 PITPNBP48739 271 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 ATP1B3P54709 279 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 DLX6P56179 175 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 MTCP1P56278 107 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 FGF12P61328 243 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 FABP5Q01469 135 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 DGUOKQ16854 277 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 ACSM3Q53FZ2 586 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 FAM27D1Q5T7N8 215 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 LIPKQ5VXJ0 399 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 Q6P435 159 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 DUX4L9Q6RFH8 374 aaPredicted RBP4.72□□□□□ -1.65
VPS36-202ENST00000462289 C17orf107Q6ZR85 190 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 C9orf139Q6ZV77 190 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 SLC25A26Q70HW3 274 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 TCF23Q7RTU1 214 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 COMMD2Q86X83 199 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 MKXQ8IYA7 352 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 ZNF561Q8N587 486 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 KIR3DL3Q8N743 410 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 NKAIN3Q8N8D7 197 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 BEND2Q8NDZ0 799 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 TBC1D15Q8TC07 691 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 UFD1Q92890 307 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 SLC25A28Q96A46 364 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 UPRTQ96BW1 309 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 MRPS24Q96EL2 167 aaKnown RBP4.72□□□□□ -1.65
VPS36-202ENST00000462289 HIST1H2AAQ96QV6 131 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 NR1H4Q96RI1 486 aaPredicted RBP4.72□□□□□ -1.65
VPS36-202ENST00000462289 GAL3ST1Q99999 423 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 DCTN5Q9BTE1 182 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 MRI1Q9BV20 369 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 SIRPDQ9H106 197 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 NOX4Q9NPH5 578 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 MMP26Q9NRE1 261 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 TAS2R4Q9NYW5 299 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 RCC2Q9P258 522 aaKnown RBP4.72□□□□□ -1.65
VPS36-202ENST00000462289 DUX4Q9UBX2 424 aa4.72□□□□□ -1.65
VPS36-202ENST00000462289 RPUSD1Q9UJJ7 312 aaKnown RBP4.72□□□□□ -1.65
VPS36-202ENST00000462289 TENM1Q9UKZ4 2725 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 A0A0G2JK05 382 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 A0A0G2JMP0 313 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 A0A0X1KG70 313 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A10PA6NDY2 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A18PA6NE21 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A16PA6NEW6 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A20PA6NIJ5 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A8PA6NJQ4 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A7PA6NKC0 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 RFPL4AA6NLU0 287 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FOXI3A8MTJ6 420 aaPredicted RBP4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A22PA8MWA6 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A12PA8MX19 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A5PA8MXJ8 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A23PA8MXZ1 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 DIRC3C9JPN6 131 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 RFPL4AL1F8VTS6 287 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 CCRL2O00421 344 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 DVL1O14640 695 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 GYPAP02724 150 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 RBP4P02753 201 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 LIPFP07098 398 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A15PP0C7V4 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A13PP0C7W8 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A14PP0C7W9 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM90A24PP0C7X0 464 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 SELLP14151 372 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 RPS2P15880 293 aaKnown RBP4.71□□□□□ -1.66
VPS36-202ENST00000462289 SRMP19623 302 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 BCL3P20749 454 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 GLRA1P23415 457 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 SOX2P48431 317 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 MTNR1BP49286 362 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 BMXP51813 675 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 RPS25P62851 125 aaKnown RBP4.71□□□□□ -1.66
VPS36-202ENST00000462289 IL13RA2Q14627 380 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 MED22Q15528 200 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 CARTPTQ16568 116 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 BEAN1Q3B7T3 259 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 ESCO2Q56NI9 601 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 ARMCX4Q5H9R4 360 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 KLF17Q5JT82 389 aaPredicted RBP4.71□□□□□ -1.66
VPS36-202ENST00000462289 SFRP4Q6FHJ7 346 aaPredicted RBP4.71□□□□□ -1.66
VPS36-202ENST00000462289 SLC36A1Q7Z2H8 476 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 NR2C2APQ86WQ0 139 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM58AQ8N1B3 248 aa4.71□□□□□ -1.66
VPS36-202ENST00000462289 FAM216BQ8N7L0 139 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms