RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 PARP16Q8N5Y8 322 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 ZNF555Q8NEP9 628 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 OR4P4Q8NGL7 312 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 FOXRED1Q96CU9 486 aaPredicted RBP12.48□□□□□ -0.41
NUP50-213ENST00000461437 MALSU1Q96EH3 234 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 MRPL48Q96GC5 212 aaKnown RBP12.48□□□□□ -0.41
NUP50-213ENST00000461437 CLEC7AQ9BXN2 247 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 SEBOXQ9HB31 216 aaPredicted RBP12.48□□□□□ -0.41
NUP50-213ENST00000461437 ZNF286AQ9HBT8 521 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 INPP5EQ9NRR6 644 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 MRPS18AQ9NVS2 196 aaKnown RBP12.48□□□□□ -0.41
NUP50-213ENST00000461437 CLEC2DQ9UHP7 191 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 GLS2Q9UI32 602 aa12.48□□□□□ -0.41
NUP50-213ENST00000461437 F2RL2O00254 374 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 DEGS1O15121 323 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 IGHV3-7P01780 117 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 RPSAP08865 295 aaKnown RBP12.47□□□□□ -0.41
NUP50-213ENST00000461437 CSF1P09603 554 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 CCDC159P0C7I6 412 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 ERP29P30040 261 aaKnown RBP12.47□□□□□ -0.41
NUP50-213ENST00000461437 OR3A4PP47883 348 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 BLCAPP62952 87 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 PDLIM3Q53GG5 364 aaPredicted RBP12.47□□□□□ -0.41
NUP50-213ENST00000461437 KLHL22Q53GT1 634 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 KRBOX4Q5JUW0 171 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 Q6ZTK2 550 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 ABHD12Q8N2K0 398 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 ZFP41Q8N8Y5 198 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 OR5D14Q8NGL3 314 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 RPS4Y2Q8TD47 263 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 TNFAIP8L1Q8WVP5 186 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 CYGBQ8WWM9 190 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 GPER1Q99527 375 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 JAM3Q9BX67 310 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 CDCA4Q9BXL8 241 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 FAM192AQ9GZU8 254 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 RANBP3Q9H6Z4 567 aaPredicted RBP12.47□□□□□ -0.41
NUP50-213ENST00000461437 RAB18Q9NP72 206 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 FGF20Q9NP95 211 aaPredicted RBP12.47□□□□□ -0.41
NUP50-213ENST00000461437 SERTAD4Q9NUC0 356 aa12.47□□□□□ -0.41
NUP50-213ENST00000461437 UBE2J1Q9Y385 318 aaPredicted RBP12.47□□□□□ -0.41
NUP50-213ENST00000461437 TRGV10A0A0A0MS01 117 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 TRAV39A0A0B4J263 110 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 ODAMA1E959 279 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 SH2D7A6NKC9 451 aaPredicted RBP12.46□□□□□ -0.41
NUP50-213ENST00000461437 H0YJX3 145 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 CDRT1O95170 752 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 CD28P10747 220 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 LMO1P25800 156 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 C17orf58Q2M2W7 97 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 C2orf68Q2NKX9 166 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 PIGYQ3MUY2 71 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 C10orf67Q8IYJ2 551 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 SAXO1Q8IYX7 474 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 STMN2Q93045 179 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 LEAP2Q969E1 77 aa12.46□□□□□ -0.41
NUP50-213ENST00000461437 TRAV24A0A0B4J272 114 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 MAGEA13PA6NCF6 341 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 RAB3AP20336 220 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 HTR1DP28221 377 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 GLP1RP43220 463 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 DOC2BQ14184 412 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 LTC4SQ16873 150 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 NSUN5P1Q3KNT7 163 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 LIAT1Q6ZQX7 453 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 OR13A1Q8NGR1 328 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 PLPPR1Q8TBJ4 325 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 KIF25Q9UIL4 384 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 PCDHGB5Q9Y5G0 923 aa12.45□□□□□ -0.42
NUP50-213ENST00000461437 PNMA8CA0A1B0GUJ8 204 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 ANKRD65E5RJM6 399 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 HTR3BO95264 441 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 NFYBP25208 207 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 PTGFRP43088 359 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 MTNR1BP49286 362 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 RBM39Q14498 530 aaKnown RBP12.44□□□□□ -0.42
NUP50-213ENST00000461437 PAN3Q58A45 887 aaKnown RBP12.44□□□□□ -0.42
NUP50-213ENST00000461437 ARSJQ5FYB0 599 aaPredicted RBP12.44□□□□□ -0.42
NUP50-213ENST00000461437 MINOS1Q5TGZ0 78 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 ZNF529Q6P280 563 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 HEPN1Q6WQI6 88 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 CFHR4Q92496 578 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 CORO2AQ92828 525 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 CYYR1Q96J86 154 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 GAL3ST2Q9H3Q3 398 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 ING4Q9UNL4 249 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 MINOS1-NBL1R4GNA1 71 aa12.44□□□□□ -0.42
NUP50-213ENST00000461437 A0A1W2PP11 408 aa12.43□□□□□ -0.42
NUP50-213ENST00000461437 G3V4G9 280 aa12.43□□□□□ -0.42
NUP50-213ENST00000461437 ALX3O95076 343 aa12.43□□□□□ -0.42
NUP50-213ENST00000461437 MRPL28Q13084 256 aaKnown RBP12.43□□□□□ -0.42
NUP50-213ENST00000461437 RCN1Q15293 331 aa12.43□□□□□ -0.42
NUP50-213ENST00000461437 RSU1Q15404 277 aa12.43□□□□□ -0.42
NUP50-213ENST00000461437 DDI2Q5TDH0 399 aa12.43□□□□□ -0.42
NUP50-213ENST00000461437 RPL22L1Q6P5R6 122 aaKnown RBP12.43□□□□□ -0.42
NUP50-213ENST00000461437 RFESDQ8TAC1 157 aa12.43□□□□□ -0.42
NUP50-213ENST00000461437 UBALD1Q8TB05 177 aa12.43□□□□□ -0.42
NUP50-213ENST00000461437 GPR148Q8TDV2 347 aa12.43□□□□□ -0.42
NUP50-213ENST00000461437 TMEM106AQ96A25 262 aa12.43□□□□□ -0.42
NUP50-213ENST00000461437 MYCBPQ99417 103 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms