RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 WWTR1Q9GZV5 400 aa13.46□□□□□ -0.26
SSR4-206ENST00000460616 C11orf1Q9H5F2 150 aa13.46□□□□□ -0.26
SSR4-206ENST00000460616 CDH20Q9HBT6 801 aa13.46□□□□□ -0.26
SSR4-206ENST00000460616 SERINC1Q9NRX5 453 aa13.46□□□□□ -0.26
SSR4-206ENST00000460616 PCNX3Q9H6A9 2034 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 PROB1E7EW31 1015 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 EREGO14944 169 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 PNLIPP16233 465 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 TMEM252Q8N6L7 170 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 SUMF1Q8NBK3 374 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 OR10A7Q8NGE5 316 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 PGAM5Q96HS1 289 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 CALHM2Q9HA72 323 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 CUL9Q8IWT3 2517 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 A0A1W2PR77 199 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 C5orf63A6NC05 138 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 NKX2-6A6NCS4 301 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 OPN1MWP04001 364 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 SP9P0CG40 484 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 OPN1MW2P0DN77 364 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 OPN1MW3P0DN78 364 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 NKX2-1P43699 371 aaPredicted RBP13.45□□□□□ -0.26
SSR4-206ENST00000460616 YPEL5P62699 121 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 RUNX1Q01196 453 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 EIF3IQ13347 325 aaKnown RBP13.45□□□□□ -0.26
SSR4-206ENST00000460616 LPAL2Q16609 132 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 PMS2CLQ68D20 193 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 LANCL3Q6ZV70 420 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 OR5L2Q8NGL0 311 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 PIGTQ969N2 578 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 ANGPTL4Q9BY76 406 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 PNRC2Q9NPJ4 139 aaKnown RBP13.45□□□□□ -0.26
SSR4-206ENST00000460616 GPR27Q9NS67 375 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 GNG13Q9P2W3 67 aa13.45□□□□□ -0.26
SSR4-206ENST00000460616 CACNA1EQ15878 2313 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 LOC102723971A0A1B0GUV8 181 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 H3BML4 177 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 DFFBO76075 338 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 CST7O76096 145 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 IL18BPO95998 194 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 GCGP01275 180 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 CD38P28907 300 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 DYNLT3P51808 116 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 C1orf61Q13536 156 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 FAM90A2PQ658T7 463 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 TMEM123Q8N131 208 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 OR1P1Q8NH06 330 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 DDIT4LQ96D03 193 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 LYZL4Q96KX0 146 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 Q96M66 194 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 METTL9Q9H1A3 318 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 LYRM2Q9NU23 88 aaPredicted RBP13.44□□□□□ -0.26
SSR4-206ENST00000460616 MMACHCQ9Y4U1 282 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 FAM221AA4D161 298 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 SSSCA1O60232 199 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 CDS2O95674 445 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 FAHP16930 419 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 VAMP2P63027 116 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 ABLIM2Q6H8Q1 611 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 TMEM217Q8N7C4 229 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 DNASE2BQ8WZ79 361 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 KLHDC7BQ96G42 594 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 TP53RKQ96S44 253 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 PCED1AQ9H1Q7 454 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 GLRX2Q9NS18 164 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 VDAC3Q9Y277 283 aa13.44□□□□□ -0.26
SSR4-206ENST00000460616 SPTY2D1-AS1A0A0U1RR47 76 aa13.43□□□□□ -0.26
SSR4-206ENST00000460616 LIPT2A6NK58 231 aa13.43□□□□□ -0.26
SSR4-206ENST00000460616 FOXF1Q12946 379 aa13.43□□□□□ -0.26
SSR4-206ENST00000460616 CARD17Q5XLA6 110 aa13.43□□□□□ -0.26
SSR4-206ENST00000460616 MAGT1Q9H0U3 335 aa13.43□□□□□ -0.26
SSR4-206ENST00000460616 HIPK2Q9H2X6 1198 aa13.43□□□□□ -0.26
SSR4-206ENST00000460616 FSCN3Q9NQT6 498 aa13.43□□□□□ -0.26
SSR4-206ENST00000460616 B3GAT1Q9P2W7 334 aa13.43□□□□□ -0.26
SSR4-206ENST00000460616 IGHG1P01857 330 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 JMJD7P0C870 316 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 EPHA1P21709 976 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 GRB2P62993 217 aaKnown RBP13.42□□□□□ -0.26
SSR4-206ENST00000460616 COL10A1Q03692 680 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 NKAIN1Q4KMZ8 207 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 LYSMD4Q5XG99 296 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 DPPA3Q6W0C5 159 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 D2HGDHQ8N465 521 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 CCDC71LQ8N9Z2 235 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.42□□□□□ -0.26
SSR4-206ENST00000460616 ST8SIA1Q92185 356 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 SOHLH2Q9NX45 425 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 COPS7AQ9UBW8 275 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 SPEGQ15772 3267 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 PHF3Q92576 2039 aaKnown RBP13.42□□□□□ -0.26
SSR4-206ENST00000460616 IGKV3D-11A0A0A0MRZ8 115 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 XKRY2A2RUG3 117 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 PGA3P0DJD8 388 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 CEACAM1P13688 526 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 DTYMKP23919 212 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 ZNF100Q8IYN0 542 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 C17orf78Q8N4C9 275 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 PP6455Q8WZ26 134 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 HIST1H2AAQ96QV6 131 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 SRD5A3Q9H8P0 318 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms