RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 CHST6Q9GZX3 395 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 UBE2J1Q9Y385 318 aaPredicted RBP13.24□□□□□ -0.29
CD28-203ENST00000458610 LINC00312Q9Y6C7 94 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 ATRQ13535 2644 aa13.24□□□□□ -0.29
CD28-203ENST00000458610 TRGV10A0A0A0MS01 117 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 C17orf98A8MV24 154 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 H3BUI4 141 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 PIN1P1O15428 100 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 CDRT1O95170 752 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 PAHP00439 452 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 FBP1P09467 338 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 CPEP16870 476 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 OR3A1P47881 315 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 KCNJ3P48549 501 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 MIDNQ504T8 468 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 HSD17B12Q53GQ0 312 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 NHLRC3Q5JS37 347 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 GLT8D1Q68CQ7 371 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 Q6P435 159 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 Q6YL49 198 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 TRAPPC6BQ86SZ2 158 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 PHC2Q8IXK0 858 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 GHRLQ9UBU3 117 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 ST3GAL6Q9Y274 331 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 MRPS28Q9Y2Q9 187 aaKnown RBP13.23□□□□□ -0.29
CD28-203ENST00000458610 LRRC42Q9Y546 428 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 POMT1Q9Y6A1 747 aa13.23□□□□□ -0.29
CD28-203ENST00000458610 DNAJC9-AS1A6NH13 148 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 SLC33A1O00400 549 aaPredicted RBP13.22□□□□□ -0.29
CD28-203ENST00000458610 ARL6IP5O75915 188 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 CCL3L1P16619 93 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 SRMP19623 302 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 MAP2K4P45985 399 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 LGALS4P56470 323 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 ACTG1P63261 375 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 ZNF273Q14593 569 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 SLC9A3R2Q15599 337 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 SLC22A6Q4U2R8 563 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 PAN3Q58A45 887 aaKnown RBP13.22□□□□□ -0.29
CD28-203ENST00000458610 OR13D1Q8NGV5 346 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 OR10K1Q8NGX5 313 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 SSMEM1Q8WWF3 244 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 GCDHQ92947 438 aaPredicted RBP13.22□□□□□ -0.29
CD28-203ENST00000458610 MUL1Q969V5 352 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 PPA2Q9H2U2 334 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 DPAGT1Q9H3H5 408 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 GAL3ST2Q9H3Q3 398 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 NCOR1P1Q9H4R4 102 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 ACOT13Q9NPJ3 140 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 ESM1Q9NQ30 184 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 TAS2R3Q9NYW6 316 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 OR6C3Q9NZP0 311 aa13.22□□□□□ -0.29
CD28-203ENST00000458610 MEIOCA2RUB1 952 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 BTBD17A6NE02 478 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 RNASE1P07998 156 aaKnown RBP13.21□□□□□ -0.29
CD28-203ENST00000458610 UBBP0CG47 229 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 SERPINA2P20848 420 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 MPV17LQ2QL34 196 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 KRBOX4Q5JUW0 171 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 AWAT2Q6E213 333 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 OR52W1Q6IF63 320 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 GLIPR1L1Q6UWM5 242 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 PIP4P2Q8N4L2 257 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 C11orf42Q8N5U0 333 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.21□□□□□ -0.29
CD28-203ENST00000458610 ZNF565Q8N9K5 539 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 CORO2AQ92828 525 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 TMEM203Q969S6 136 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 IFT22Q9H7X7 185 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 SPACA1Q9HBV2 294 aa13.21□□□□□ -0.29
CD28-203ENST00000458610 SOX21Q9Y651 276 aaPredicted RBP13.21□□□□□ -0.29
CD28-203ENST00000458610 A0A0U1RQK1 487 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 HOXA3O43365 443 aaPredicted RBP13.2□□□□□ -0.3
CD28-203ENST00000458610 SC5DO75845 299 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 OR7C1O76099 320 aaPredicted RBP13.2□□□□□ -0.3
CD28-203ENST00000458610 CRYBA1P05813 215 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 MELTFP08582 738 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 UCHL1P09936 223 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 GABRA5P31644 462 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 DLX6P56179 175 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 RBM11P57052 281 aaKnown RBP13.2□□□□□ -0.3
CD28-203ENST00000458610 AESQ08117 197 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 KLRD1Q13241 179 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 C16orf87Q6PH81 154 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 LDLRAD3Q86YD5 345 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 TPRX1Q8N7U7 411 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 FCGR1BQ92637 280 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 CST11Q9H112 138 aa13.2□□□□□ -0.3
CD28-203ENST00000458610 MXRA5Q9NR99 2828 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 MDFIC2A0A1B0GVS7 189 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 A0A1W2PRD5 423 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 A0A1W2PRF3 423 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 A0A1W2PRM7 423 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 ODAMA1E959 279 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 MAGEA13PA6NCF6 341 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A10PA6NDY2 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A18PA6NE21 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A16PA6NEW6 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A20PA6NIJ5 464 aa13.19□□□□□ -0.3
CD28-203ENST00000458610 FAM90A8PA6NJQ4 464 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms