RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 FOXL1Q12952 345 aa15.24■□□□□ 0.03
USP39-209ENST00000458268 PAN3Q58A45 887 aaKnown RBP15.24■□□□□ 0.03
USP39-209ENST00000458268 ZNF529Q6P280 563 aa15.24■□□□□ 0.03
USP39-209ENST00000458268 TCF23Q7RTU1 214 aa15.24■□□□□ 0.03
USP39-209ENST00000458268 PXT1Q8NFP0 134 aa15.24■□□□□ 0.03
USP39-209ENST00000458268 MUL1Q969V5 352 aa15.24■□□□□ 0.03
USP39-209ENST00000458268 PRDM13Q9H4Q3 707 aa15.24■□□□□ 0.03
USP39-209ENST00000458268 UNKLQ9H9P5 680 aaKnown RBP15.24■□□□□ 0.03
USP39-209ENST00000458268 A0A0G2JK05 382 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 FAM172BPA6NC97 362 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 SLC33A1O00400 549 aaPredicted RBP15.23■□□□□ 0.03
USP39-209ENST00000458268 GPR137BO60478 399 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 CFPP27918 469 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 IER3P46695 156 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 DLX6P56179 175 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 ACSM1Q08AH1 577 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 INSL4Q14641 139 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 LY6EQ16553 131 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 SLC22A6Q4U2R8 563 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 KRBOX4Q5JUW0 171 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 PRAMEF5Q5TYX0 476 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 Q6P435 159 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 LDLRAD3Q86YD5 345 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 C11orf42Q8N5U0 333 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 OR13D1Q8NGV5 346 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 DERL3Q96Q80 235 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 RHOFQ9HBH0 211 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 POMT1Q9Y6A1 747 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 LINC00312Q9Y6C7 94 aa15.23■□□□□ 0.03
USP39-209ENST00000458268 TRGV10A0A0A0MS01 117 aa15.22■□□□□ 0.03
USP39-209ENST00000458268 FUOMA2VDF0 154 aa15.22■□□□□ 0.03
USP39-209ENST00000458268 C17orf98A8MV24 154 aa15.22■□□□□ 0.03
USP39-209ENST00000458268 ALDOBP05062 364 aa15.22■□□□□ 0.03
USP39-209ENST00000458268 IGHV1-8P0DP01 117 aa15.22■□□□□ 0.03
USP39-209ENST00000458268 IGFBP3P17936 291 aaPredicted RBP15.22■□□□□ 0.03
USP39-209ENST00000458268 MDKP21741 143 aaPredicted RBP15.22■□□□□ 0.03
USP39-209ENST00000458268 GLP1RP43220 463 aa15.22■□□□□ 0.03
USP39-209ENST00000458268 SPHARQ15513 63 aa15.22■□□□□ 0.03
USP39-209ENST00000458268 LHFPL4Q7Z7J7 247 aa15.22■□□□□ 0.03
USP39-209ENST00000458268 NEK7Q8TDX7 302 aa15.22■□□□□ 0.03
USP39-209ENST00000458268 CDCA4Q9BXL8 241 aa15.22■□□□□ 0.03
USP39-209ENST00000458268 PPIL3Q9H2H8 161 aaKnown RBP15.22■□□□□ 0.03
USP39-209ENST00000458268 ST3GAL6Q9Y274 331 aa15.22■□□□□ 0.03
USP39-209ENST00000458268 MRPS28Q9Y2Q9 187 aaKnown RBP15.22■□□□□ 0.03
USP39-209ENST00000458268 TRBV5-7A0A0A0MS05 114 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 A0A1W2PP11 408 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 H3BUX3 64 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 CLPXO76031 633 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 OR7C1O76099 320 aaPredicted RBP15.21■□□□□ 0.03
USP39-209ENST00000458268 FSTP19883 344 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 MAPK3P27361 379 aaPredicted RBP15.21■□□□□ 0.03
USP39-209ENST00000458268 VHLP40337 213 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 MAP2K4P45985 399 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 RAG2P55895 527 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 SLC35A2P78381 396 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 TAF9Q16594 264 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 MIDNQ504T8 468 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 ACSM3Q53FZ2 586 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 RBM48Q5RL73 367 aaKnown RBP15.21■□□□□ 0.03
USP39-209ENST00000458268 ATAD3CQ5T2N8 411 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 FAM27D1Q5T7N8 215 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 LIPKQ5VXJ0 399 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 AWAT2Q6E213 333 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 OSR2Q8N2R0 312 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 TMEM86BQ8N661 226 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 CHST4Q8NCG5 386 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 UFD1Q92890 307 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 TMEM203Q969S6 136 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 SEBOXQ9HB31 216 aaPredicted RBP15.21■□□□□ 0.03
USP39-209ENST00000458268 ZNF581Q9P0T4 197 aa15.21■□□□□ 0.03
USP39-209ENST00000458268 ODAMA1E959 279 aa15.2■□□□□ 0.02
USP39-209ENST00000458268 BDH1Q02338 343 aa15.2■□□□□ 0.02
USP39-209ENST00000458268 ELP2Q6IA86 826 aa15.2■□□□□ 0.02
USP39-209ENST00000458268 GLIPR1L1Q6UWM5 242 aa15.2■□□□□ 0.02
USP39-209ENST00000458268 NDNFQ8TB73 568 aa15.2■□□□□ 0.02
USP39-209ENST00000458268 COQ2Q96H96 371 aa15.2■□□□□ 0.02
USP39-209ENST00000458268 SSX3Q99909 188 aa15.2■□□□□ 0.02
USP39-209ENST00000458268 SLITRK2Q9H156 845 aa15.2■□□□□ 0.02
USP39-209ENST00000458268 GAL3ST2Q9H3Q3 398 aa15.2■□□□□ 0.02
USP39-209ENST00000458268 TCF7L1Q9HCS4 588 aa15.2■□□□□ 0.02
USP39-209ENST00000458268 KIF25Q9UIL4 384 aa15.2■□□□□ 0.02
USP39-209ENST00000458268 LSM2Q9Y333 95 aaKnown RBP15.2■□□□□ 0.02
USP39-209ENST00000458268 SESN1Q9Y6P5 492 aa15.2■□□□□ 0.02
USP39-209ENST00000458268 MEIKINA0A087WXM9 373 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 PIN1P1O15428 100 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 MMP23AO75900 390 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 CRHBPP24387 322 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 CDK2P24941 298 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 LMO1P25800 156 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 ERP29P30040 261 aaKnown RBP15.19■□□□□ 0.02
USP39-209ENST00000458268 COMPP49747 757 aaPredicted RBP15.19■□□□□ 0.02
USP39-209ENST00000458268 IL13RA2Q14627 380 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 FAM189A2Q15884 450 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 LTC4SQ16873 150 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 LRRC75BQ2VPJ9 315 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 DHRS7BQ6IAN0 325 aaPredicted RBP15.19■□□□□ 0.02
USP39-209ENST00000458268 BAIAP2L2Q6UXY1 529 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 CEACAM19Q7Z692 300 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 BEND2Q8NDZ0 799 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 DYRK2Q92630 601 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms