RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PRR35P0CG20 571 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 IL9P15248 144 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 PMELP40967 661 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 SLC23A3Q6PIS1 610 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 RND1Q92730 232 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 CCL28Q9NRJ3 127 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 ANKRD20A5PA0PJZ0 165 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 ECSCRQ19T08 205 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 UQCC3Q6UW78 93 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 SNX22Q96L94 193 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 ZNF488Q96MN9 340 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 TINAGQ9UJW2 476 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 F12P00748 615 aaPredicted RBP17.34■□□□□ 0.37
SNX27-204ENST00000458013 DLK1P80370 383 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 CLEC18BQ6UXF7 455 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 SH2D2AQ9NP31 389 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 PCMT1P22061 227 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 SSPNQ14714 243 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 RBPMS2Q6ZRY4 209 aaKnown RBP17.34■□□□□ 0.37
SNX27-204ENST00000458013 RAB40CQ96S21 281 aa17.34■□□□□ 0.37
SNX27-204ENST00000458013 TJP1Q07157 1748 aa17.33■□□□□ 0.37
SNX27-204ENST00000458013 C11orf94C9JXX5 98 aa17.33■□□□□ 0.37
SNX27-204ENST00000458013 CCL4P13236 92 aa17.33■□□□□ 0.37
SNX27-204ENST00000458013 KIAA0040Q15053 153 aa17.33■□□□□ 0.37
SNX27-204ENST00000458013 TRIP6Q15654 476 aaKnown RBP17.33■□□□□ 0.37
SNX27-204ENST00000458013 UCN2Q96RP3 112 aa17.33■□□□□ 0.37
SNX27-204ENST00000458013 TECRQ9NZ01 308 aaKnown RBP17.33■□□□□ 0.37
SNX27-204ENST00000458013 STARD10Q9Y365 291 aa17.33■□□□□ 0.37
SNX27-204ENST00000458013 CXCL10P02778 98 aa17.33■□□□□ 0.36
SNX27-204ENST00000458013 INHBBP09529 407 aa17.33■□□□□ 0.36
SNX27-204ENST00000458013 MDH2P40926 338 aaKnown RBP17.33■□□□□ 0.36
SNX27-204ENST00000458013 SPCS3P61009 180 aa17.33■□□□□ 0.36
SNX27-204ENST00000458013 RPL24P83731 157 aaKnown RBP17.33■□□□□ 0.36
SNX27-204ENST00000458013 TRAV17A0A0B4J275 112 aa17.33■□□□□ 0.36
SNX27-204ENST00000458013 CGB1A6NKQ9 187 aa17.33■□□□□ 0.36
SNX27-204ENST00000458013 D2HGDHQ8N465 521 aa17.33■□□□□ 0.36
SNX27-204ENST00000458013 IFT22Q9H7X7 185 aa17.33■□□□□ 0.36
SNX27-204ENST00000458013 FUT9Q9Y231 359 aa17.33■□□□□ 0.36
SNX27-204ENST00000458013 CLDN34H7C241 214 aa17.33■□□□□ 0.36
SNX27-204ENST00000458013 MGAT2Q10469 447 aa17.33■□□□□ 0.36
SNX27-204ENST00000458013 LPAR3Q9UBY5 353 aa17.33■□□□□ 0.36
SNX27-204ENST00000458013 PDE4DIPQ5VU43 2346 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 PDCD6O75340 191 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 CISD3P0C7P0 127 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 ACP1P24666 158 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 RAB7AP51149 207 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 TMEM108Q6UXF1 575 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 C1QCP02747 245 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 MRPL24Q96A35 216 aaKnown RBP17.32■□□□□ 0.36
SNX27-204ENST00000458013 GSTZ1O43708 216 aaPredicted RBP17.32■□□□□ 0.36
SNX27-204ENST00000458013 SLC6A1P30531 599 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 OR2D3Q8NGH3 330 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 A0A1W2PN81 502 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 KIR2DS2P43631 304 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 TFPI2P48307 235 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 HLA-DRB3P79483 266 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 AESQ08117 197 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 HSD17B13Q7Z5P4 300 aaPredicted RBP17.32■□□□□ 0.36
SNX27-204ENST00000458013 ZNF547Q8IVP9 402 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 GPX7Q96SL4 187 aaPredicted RBP17.32■□□□□ 0.36
SNX27-204ENST00000458013 SRSF10O75494 262 aaKnown RBP17.32■□□□□ 0.36
SNX27-204ENST00000458013 EML2O95834 649 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 PGA3P0DJD8 388 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 C1orf210Q8IVY1 113 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 OR11H7Q8NGC8 314 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 OR4D10Q8NGI6 311 aa17.32■□□□□ 0.36
SNX27-204ENST00000458013 TRDCB7Z8K6 153 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 SCGB1D4Q6XE38 83 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 OR52L2PQ8NGH6 319 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 SLC7A10Q9NS82 523 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 IGKV3D-15A0A087WSY6 115 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 IGKV3-15P01624 115 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 IL11P20809 199 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 MRPS11P82912 194 aaKnown RBP17.31■□□□□ 0.36
SNX27-204ENST00000458013 TNRC6CQ9HCJ0 1690 aaKnown RBP17.31■□□□□ 0.36
SNX27-204ENST00000458013 PSG2P11465 335 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 PRSS54Q6PEW0 395 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 NUFIP2Q7Z417 695 aaKnown RBP17.31■□□□□ 0.36
SNX27-204ENST00000458013 ZNF383Q8NA42 475 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 MRGPRFQ96AM1 343 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 CLN8Q9UBY8 286 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 AMMECR1Q9Y4X0 333 aaPredicted RBP17.31■□□□□ 0.36
SNX27-204ENST00000458013 hADV38S2A0JD32 116 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 H7C2G1 150 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 CST2P09228 141 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 RCC1P18754 421 aaPredicted RBP17.31■□□□□ 0.36
SNX27-204ENST00000458013 LGALS7P47929 136 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 PRNTQ86SH4 94 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 SLC26A10Q8NG04 563 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 PKD1L3Q7Z443 1732 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 LEUTXA8MZ59 168 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 F2RL2O00254 374 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 SLC35B1P78383 322 aa17.31■□□□□ 0.36
SNX27-204ENST00000458013 BMI1P35226 326 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 ZAR1Q86SH2 424 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 ZFP64Q9NPA5 681 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 DPPA3Q6W0C5 159 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 DOCK2Q92608 1830 aa17.3■□□□□ 0.36
SNX27-204ENST00000458013 INPP5JQ15735 1006 aaPredicted RBP17.3■□□□□ 0.36
SNX27-204ENST00000458013 HLA-DRB5Q30154 266 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms