RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 PLSCR5A0PG75 271 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 RFPL4AA6NLU0 287 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 OR2AT4A6NND4 320 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 RFPL4AL1F8VTS6 287 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 M0R233 179 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 SULT1C2O00338 296 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 SDCBPO00560 298 aaPredicted RBP7.3□□□□□ -1.24
RIF1-208ENST00000457745 ZNF737O75373 536 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 RBBP9O75884 186 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 ACAA1P09110 424 aaPredicted RBP7.3□□□□□ -1.24
RIF1-208ENST00000457745 FUT3P21217 361 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 GLRA1P23415 457 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 COL8A2P25067 703 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 APOBEC3AP31941 199 aaPredicted RBP7.3□□□□□ -1.24
RIF1-208ENST00000457745 RCVRNP35243 200 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 HRH1P35367 487 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 MRPS10P82664 201 aaKnown RBP7.3□□□□□ -1.24
RIF1-208ENST00000457745 COL10A1Q03692 680 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 ARFRP1Q13795 201 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 HERPUD1Q15011 391 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 ZNF146Q15072 292 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 PNLIPRP3Q17RR3 467 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 HIST2H2BCQ6DN03 193 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 STEAP1BQ6NZ63 245 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 LYPD2Q6UXB3 125 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 CADM3Q8N126 398 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 MUC15Q8N387 334 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 FAM216BQ8N7L0 139 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 DEFB108BQ8NET1 73 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 OR51S1Q8NGJ8 323 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 OR4K15Q8NH41 348 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 Q8TCH9 128 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 FAM222BQ8WU58 562 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 IGFBPL1Q8WX77 278 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 NRGNQ92686 78 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 CREB3L1Q96BA8 519 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 PHF21AQ96BD5 680 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 MRPS24Q96EL2 167 aaKnown RBP7.3□□□□□ -1.24
RIF1-208ENST00000457745 CPNE2Q96FN4 548 aaPredicted RBP7.3□□□□□ -1.24
RIF1-208ENST00000457745 TRAF4Q9BUZ4 470 aaPredicted RBP7.3□□□□□ -1.24
RIF1-208ENST00000457745 ST6GALNAC5Q9BVH7 336 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 DPCDQ9BVM2 203 aaPredicted RBP7.3□□□□□ -1.24
RIF1-208ENST00000457745 SHARPINQ9H0F6 387 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 PARP12Q9H0J9 701 aaKnown RBP7.3□□□□□ -1.24
RIF1-208ENST00000457745 FAIMQ9NVQ4 179 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 PLEKHJ1Q9NW61 149 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 MAB21L2Q9Y586 359 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 FAM208BQ5VWN6 2430 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 KIAA2026Q5HYC2 2103 aa7.3□□□□□ -1.24
RIF1-208ENST00000457745 USF3Q68DE3 2245 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 SPTAN1Q13813 2472 aaKnown RBP7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A10PA6NDY2 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A18PA6NE21 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A16PA6NEW6 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A20PA6NIJ5 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A8PA6NJQ4 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A7PA6NKC0 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 A6NNC1 897 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A22PA8MWA6 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A12PA8MX19 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A5PA8MXJ8 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A23PA8MXZ1 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 PRSS44E7EML9 344 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 TNFRSF13BO14836 293 aaPredicted RBP7.29□□□□□ -1.24
RIF1-208ENST00000457745 DEGS1O15121 323 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 CA11O75493 328 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 RP2O75695 350 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 GYPAP02724 150 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 SCTP09683 121 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A15PP0C7V4 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A13PP0C7W8 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A14PP0C7W9 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 FAM90A24PP0C7X0 464 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 GSTT2P0CG29 244 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 GSTT2BP0CG30 244 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 PLA2G2AP14555 144 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 ZNF44P15621 663 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 RCC1P18754 421 aaPredicted RBP7.29□□□□□ -1.24
RIF1-208ENST00000457745 CFHR2P36980 270 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 CDKN1AP38936 164 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 DYRK1AQ13627 763 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 MPV17LQ2QL34 196 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 STUMQ69YW2 141 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 ZNF880Q6PDB4 577 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 SSX8Q7RTT4 187 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 TCF23Q7RTU1 214 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 ZNF295-AS1Q8N0V1 137 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 SPERTQ8NA61 448 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 DUSP18Q8NEJ0 188 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 BEST4Q8NFU0 473 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 OR10Z1Q8NGY1 313 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 ANGPTL6Q8NI99 470 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 CCDC107Q8WV48 283 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 GAFA1Q96PS6 74 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 CMSS1Q9BQ75 279 aaKnown RBP7.29□□□□□ -1.24
RIF1-208ENST00000457745 IFT22Q9H7X7 185 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 UBTD1Q9HAC8 227 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 DYNLRB1Q9NP97 96 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 ZNF701Q9NV72 531 aaPredicted RBP7.29□□□□□ -1.24
RIF1-208ENST00000457745 NKIRAS2Q9NYR9 191 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms