RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 HEXAP06865 529 aa15.8■□□□□ 0.12
SEMA3B-209ENST00000456560 SP1P08047 785 aa15.8■□□□□ 0.12
SEMA3B-209ENST00000456560 RPL12P30050 165 aaKnown RBP15.8■□□□□ 0.12
SEMA3B-209ENST00000456560 FXYD4P59646 89 aa15.8■□□□□ 0.12
SEMA3B-209ENST00000456560 SP6Q3SY56 376 aa15.8■□□□□ 0.12
SEMA3B-209ENST00000456560 OR2A2Q6IF42 318 aa15.8■□□□□ 0.12
SEMA3B-209ENST00000456560 MDS2Q8NDY4 140 aa15.8■□□□□ 0.12
SEMA3B-209ENST00000456560 LILRB1Q8NHL6 650 aaPredicted RBP15.8■□□□□ 0.12
SEMA3B-209ENST00000456560 PRRX2Q99811 253 aa15.8■□□□□ 0.12
SEMA3B-209ENST00000456560 ZNF442Q9H7R0 627 aa15.8■□□□□ 0.12
SEMA3B-209ENST00000456560 NME2P1O60361 137 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 OR7C1O76099 320 aaPredicted RBP15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 HOXB1P14653 301 aaPredicted RBP15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 BCL3P20749 454 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 NME2P22392 152 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 MEOX1P50221 254 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 CAV2P51636 162 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 EIF5AP63241 154 aaKnown RBP15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 CEACAM21Q3KPI0 293 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 RPL7L1Q6DKI1 246 aaKnown RBP15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 SAT2Q96F10 170 aaPredicted RBP15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 C18orf12Q96KH6 178 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 POM121L2Q96KW2 1035 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 RSRP1Q9BUV0 290 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 SLC2A9Q9NRM0 540 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 PLSCR2Q9NRY7 297 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 AHCTF1Q8WYP5 2266 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 TNRC6AQ8NDV7 1962 aaKnown RBP15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 MEX3AA1L020 520 aaKnown RBP15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 H7C1Q1 480 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 ARR3P36575 388 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 S100A12P80511 92 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 LIAT1Q6ZQX7 453 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 Q6ZS49 121 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 MRPL21Q7Z2W9 205 aaKnown RBP15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 NUFIP2Q7Z417 695 aaKnown RBP15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 BATF2Q8N1L9 274 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 DMBX1Q8NFW5 382 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 IP6K3Q96PC2 410 aa15.79■□□□□ 0.12
SEMA3B-209ENST00000456560 PRSS44E7EML9 344 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 K7EPK0 472 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 SFTA3P0C7M3 94 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 AADACP22760 399 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 GLP1RP43220 463 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 RAB1AP62820 205 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 SMCO1Q147U7 214 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 PEA15Q15121 130 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 RNPS1Q15287 305 aaKnown RBP15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 PHLDA2Q53GA4 152 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 ZDHHC23Q8IYP9 409 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 FAM71E2Q8N5Q1 922 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 SFT2D1Q8WV19 159 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 EXTL1Q92935 676 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 SLAMF9Q96A28 289 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 MSI2Q96DH6 328 aaKnown RBP15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 SMIM8Q96KF7 97 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 HS3ST6Q96QI5 342 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 TMEM9BQ9NQ34 198 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 AMDHD2Q9Y303 409 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 RNASEK-C17orf49H0YIS7 233 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 LRP3O75074 770 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 MED6O75586 246 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 NGFP01138 241 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 IFNA4P05014 189 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 FGF12P61328 243 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 C3AR1Q16581 482 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 SRSF7Q16629 238 aaKnown RBP eCLIP15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 TMEM268Q5VZI3 342 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 LYZL2Q7Z4W2 148 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 OR11L1Q8NGX0 322 aa15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 KLF13Q9Y2Y9 288 aaPredicted RBP15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 LSM5Q9Y4Y9 91 aaKnown RBP15.78■□□□□ 0.12
SEMA3B-209ENST00000456560 MBPP02686 304 aaPredicted RBP15.77■□□□□ 0.12
SEMA3B-209ENST00000456560 GAPDHP04406 335 aaKnown RBP15.77■□□□□ 0.12
SEMA3B-209ENST00000456560 LPAR6P43657 344 aa15.77■□□□□ 0.12
SEMA3B-209ENST00000456560 HAAOP46952 286 aa15.77■□□□□ 0.12
SEMA3B-209ENST00000456560 GPM6AP51674 278 aa15.77■□□□□ 0.12
SEMA3B-209ENST00000456560 SWI5Q1ZZU3 235 aa15.77■□□□□ 0.12
SEMA3B-209ENST00000456560 DHRS13Q6UX07 377 aa15.77■□□□□ 0.12
SEMA3B-209ENST00000456560 SYT3Q9BQG1 590 aa15.77■□□□□ 0.12
SEMA3B-209ENST00000456560 TAF9BQ9HBM6 251 aa15.77■□□□□ 0.12
SEMA3B-209ENST00000456560 MED13Q9UHV7 2174 aa15.77■□□□□ 0.11
SEMA3B-209ENST00000456560 RIF1Q5UIP0 2472 aaKnown RBP15.77■□□□□ 0.11
SEMA3B-209ENST00000456560 TNFSF15O95150 251 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 EIF5AL1Q6IS14 154 aaKnown RBP15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 PLEKHA2Q9HB19 425 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 MTCH1Q9NZJ7 389 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 FBXL17Q9UF56 701 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 ZNF732B4DXR9 585 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 KLRC4-KLRK1H3BQV0 150 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 NAPSAO96009 420 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 PPYP01298 95 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 RCC1P18754 421 aaPredicted RBP15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 HERV-K104P61576 105 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 IGSF11Q5DX21 431 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 LGI3Q8N145 548 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 OR5L1Q8NGL2 311 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 FER1L6-AS2Q96M78 137 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 Q9N2K0 584 aa15.76■□□□□ 0.11
SEMA3B-209ENST00000456560 LIPGQ9Y5X9 500 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms