RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 A0A1W2PQL4 384 aaPredicted RBP9.38□□□□□ -0.91
LMCD1-206ENST00000456506 ZAR1LA6NP61 321 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 OOSP1A8MZH6 123 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 ZNF670-ZNF695F2Z2N8 137 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 SIRPB1O00241 398 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 GNGT2O14610 69 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 SYT7O43581 403 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 BAG2O95816 211 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 CLIC3O95833 236 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 OR2H2O95918 312 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 CSN2P05814 226 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 SLC6A1P30531 599 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 RBP2P50120 134 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 CDC42P60953 191 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 AESQ08117 197 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 KHDC1LQ5JSQ8 128 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 Q6P435 159 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 TRAPPC6BQ86SZ2 158 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 THNSL2Q86YJ6 484 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 TCEANCQ8N8B7 351 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 C5orf56Q8N8D9 126 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 C10orf35Q96D05 121 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 BORCS8Q96FH0 119 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 NOL4LQ96MY1 436 aaPredicted RBP9.38□□□□□ -0.91
LMCD1-206ENST00000456506 ZNF649Q9BS31 505 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 OSBPL10Q9BXB5 764 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 COMMD4Q9H0A8 199 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 GAL3ST2Q9H3Q3 398 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 PLEKHA1Q9HB21 404 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 MOB4Q9Y3A3 225 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 HSPE1-MOB4S4R3N1 261 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 U3KQK5 164 aa9.38□□□□□ -0.91
LMCD1-206ENST00000456506 TRGV10A0A0A0MS01 117 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 LOC107986453A0A1B0GWG9 222 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 ODAMA1E959 279 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 H3BUI4 141 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 M0QZK8 103 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 MITFO75030 526 aaPredicted RBP9.37□□□□□ -0.91
LMCD1-206ENST00000456506 KDM4BO94953 1096 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 SNRNP70P08621 437 aaKnown RBP9.37□□□□□ -0.91
LMCD1-206ENST00000456506 NHLRC4P0CG21 123 aaPredicted RBP9.37□□□□□ -0.91
LMCD1-206ENST00000456506 PRKACAP17612 351 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 CEACAM3P40198 252 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 MYCNOSP40205 109 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 VHLP40337 213 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 OR3A4PP47883 348 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 SNU13P55769 128 aaKnown RBP9.37□□□□□ -0.91
LMCD1-206ENST00000456506 PDZK1IP1Q13113 114 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 DIAPH2-AS1Q14236 149 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 AMIGO2Q86SJ2 522 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 RDH10Q8IZV5 341 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 PACRGLQ8N7B6 248 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 YIPF7Q8N8F6 280 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 CCDC54Q8NEL0 328 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 OR51D1Q8NGF3 324 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 PP6455Q8WZ26 134 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 DPF1Q92782 380 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 TBX5Q99593 518 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 MCRIP2Q9BUT9 160 aaKnown RBP9.37□□□□□ -0.91
LMCD1-206ENST00000456506 TEX12Q9BXU0 123 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 PPIL3Q9H2H8 161 aaKnown RBP9.37□□□□□ -0.91
LMCD1-206ENST00000456506 VCX3BQ9H321 246 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 ZFP57Q9NU63 452 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 HYDINQ4G0P3 5121 aa9.37□□□□□ -0.91
LMCD1-206ENST00000456506 METTL15A6NJ78 407 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 LINC01548A6NM66 108 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 SLC33A1O00400 549 aaPredicted RBP9.36□□□□□ -0.91
LMCD1-206ENST00000456506 SULT1C4O75897 302 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 IGHG2P01859 326 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 KRT8P05787 483 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 ATF1P18846 271 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 PTGFRP43088 359 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 DGCR2P98153 550 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 ZNF85Q03923 595 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 DCTN2Q13561 401 aaKnown RBP9.36□□□□□ -0.91
LMCD1-206ENST00000456506 CDK5R1Q15078 307 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 C9orf152Q5JTZ5 239 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 UTS2BQ765I0 119 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 OR56B4Q8NH76 319 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 CAPSLQ8WWF8 208 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 CREB3L1Q96BA8 519 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 RAX2Q96IS3 184 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 KIRREL1Q96J84 757 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 DUX3Q96PT4 197 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 MBOAT4Q96T53 435 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 LINC00574Q9H8X3 128 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 LINC00527Q9UJ94 153 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 LRRC42Q9Y546 428 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 TENM2Q9NT68 2774 aa9.36□□□□□ -0.91
LMCD1-206ENST00000456506 ZNF729A6NN14 1252 aaPredicted RBP9.35□□□□□ -0.91
LMCD1-206ENST00000456506 FGF16O43320 207 aa9.35□□□□□ -0.91
LMCD1-206ENST00000456506 APOL3O95236 402 aa9.35□□□□□ -0.91
LMCD1-206ENST00000456506 OR2T7P0C7T2 308 aa9.35□□□□□ -0.91
LMCD1-206ENST00000456506 UBCP0CG48 685 aaKnown RBP9.35□□□□□ -0.91
LMCD1-206ENST00000456506 POU3F4P49335 361 aa9.35□□□□□ -0.91
LMCD1-206ENST00000456506 ARHGDIBP52566 201 aa9.35□□□□□ -0.91
LMCD1-206ENST00000456506 ATP1B3P54709 279 aa9.35□□□□□ -0.91
LMCD1-206ENST00000456506 MTCP1P56278 107 aa9.35□□□□□ -0.91
LMCD1-206ENST00000456506 KDM4DQ6B0I6 523 aa9.35□□□□□ -0.91
LMCD1-206ENST00000456506 CCDC144NLQ6NUI1 221 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms