RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 IGHV3-7P01780 117 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 SCTP09683 121 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 KCNMB1Q16558 191 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 IZUMO4Q1ZYL8 232 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 EIF5AL1Q6IS14 154 aaKnown RBP10.35□□□□□ -0.75
SMPD4-213ENST00000454468 BEND4Q6ZU67 534 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 RNF141Q8WVD5 230 aa10.35□□□□□ -0.75
SMPD4-213ENST00000454468 CD300LBA8K4G0 201 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 NXPH2O95156 264 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 SP1P08047 785 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 RPS16P62249 146 aaKnown RBP10.34□□□□□ -0.75
SMPD4-213ENST00000454468 VAX1Q5SQQ9 334 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 ZPBPQ9BS86 351 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 PRO3102Q9H379 93 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 ZNF703Q9H7S9 590 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-213ENST00000454468 SLC2A9Q9NRM0 540 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 V9GYS6 101 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 PLCE1Q9P212 2302 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 ETV2O00321 342 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-213ENST00000454468 SSSCA1O60232 199 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 C1QL1O75973 258 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 SERPINE2P07093 398 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 GP1BAP07359 652 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 SUPT4H1P63272 117 aaKnown RBP10.34□□□□□ -0.75
SMPD4-213ENST00000454468 HOXA4Q00056 320 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-213ENST00000454468 CNTNAP3BQ96NU0 1288 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 SLC25A32Q9H2D1 315 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 RAB18Q9NP72 206 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 FBXL17Q9UF56 701 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 KCNMB2Q9Y691 235 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 TXNL1O43396 289 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 TSPAN15O95858 294 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 S100GP29377 79 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 ERVS71-1P61550 626 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 TFAP2EQ6VUC0 442 aa10.34□□□□□ -0.75
SMPD4-213ENST00000454468 ZC3H10Q96K80 434 aaKnown RBP10.34□□□□□ -0.75
SMPD4-213ENST00000454468 LOC400499M0QZD8 3231 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 DEGS1O15121 323 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 HOXA6P31267 233 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 TMEM33P57088 247 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 TLE1Q04724 770 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 H3F3CQ6NXT2 135 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 DNM1P46Q6ZS02 220 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 CLRN3Q8NCR9 226 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 CA5BP1Q8WTZ4 195 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 APOBEC3DQ96AK3 386 aaPredicted RBP10.33□□□□□ -0.76
SMPD4-213ENST00000454468 SLC2A8Q9NY64 477 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 RASL12Q9NYN1 266 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 CRIM1Q9NZV1 1036 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 MFSD2BA6NFX1 497 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 CYTIPO60759 359 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 LILRA1O75019 489 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 TUSC2O75896 110 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 CD59P13987 128 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 FOXO1Q12778 655 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 NSUN5P2Q63ZY6 315 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 PRSS54Q6PEW0 395 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 Q6ZRG5 221 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 MDP1Q86V88 176 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 CCDC71LQ8N9Z2 235 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 SLC30A7Q8NEW0 376 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 FAM213BQ8TBF2 198 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 PIK3IP1Q96FE7 263 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 FAM234AQ9H0X4 552 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 ASPMQ8IZT6 3477 aa10.33□□□□□ -0.76
SMPD4-213ENST00000454468 CDIPTO14735 213 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 EIF5AP63241 154 aaKnown RBP10.32□□□□□ -0.76
SMPD4-213ENST00000454468 GTF3C1Q12789 2109 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 DPPA2Q7Z7J5 298 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 CMTM1Q8IZ96 169 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 ZNF808Q8N4W9 903 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-213ENST00000454468 PRRX2Q99811 253 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 SPOCK3Q9BQ16 436 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 RNF126Q9BV68 326 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 CCL28Q9NRJ3 127 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 DOCK11Q5JSL3 2073 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 BORCS7-ASMTA0A0B4J1R7 106 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 A0A1W2PNU3 283 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-213ENST00000454468 SNAPC5O75971 98 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 TFF1P04155 84 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 CELA3BP08861 270 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 PVALBP20472 110 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-213ENST00000454468 ZP3P21754 424 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 CRYGSP22914 178 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 CEBPDP49716 269 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-213ENST00000454468 MECP2P51608 486 aaKnown RBP10.32□□□□□ -0.76
SMPD4-213ENST00000454468 S100A12P80511 92 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 MRPL49Q13405 166 aaKnown RBP10.32□□□□□ -0.76
SMPD4-213ENST00000454468 EDDM3AQ14507 147 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 RTL6Q6ICC9 239 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 SPAG16Q8N0X2 631 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 LGI3Q8N145 548 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 RFESDQ8TAC1 157 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 OR2J1Q9GZK6 312 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 ZNF107Q9UII5 783 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-213ENST00000454468 ERRFI1Q9UJM3 462 aaPredicted RBP10.32□□□□□ -0.76
SMPD4-213ENST00000454468 MGAQ8IWI9 3026 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 NBEAQ8NFP9 2946 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 hCG_38984A0A1B0GV85 526 aa10.32□□□□□ -0.76
SMPD4-213ENST00000454468 FAM24AA6NFZ4 105 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms