RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 UCHL3P15374 230 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZNF17P17021 662 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 RAB3BP20337 219 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 AQP1P29972 269 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 FMO3P31513 532 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 CD79BP40259 229 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 TTPAP49638 278 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 CLDN12P56749 244 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 RIPPLY3P57055 190 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 BAXQ07812 192 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 TCP10Q12799 353 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM53BQ14153 422 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 CDNFQ49AH0 187 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZNF620Q6ZNG0 422 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 TEX43Q6ZNM6 134 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 TAC4Q86UU9 113 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 SLC34A3Q8N130 599 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 GAPTQ8N292 157 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 TBC1D19Q8N5T2 526 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 UBAC2Q8NBM4 344 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 PXT1Q8NFP0 134 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR2D3Q8NGH3 330 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 BLOC1S5Q8TDH9 187 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM172AQ8WUF8 416 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 RAB8BQ92930 207 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 NTAN1Q96AB6 310 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 ANKRD9Q96BM1 317 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 DCPSQ96C86 337 aaKnown RBP2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 PPP1R36Q96LQ0 422 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 CDX2Q99626 313 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 TMEM208Q9BTX3 173 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 YTHDF1Q9BYJ9 559 aaKnown RBP2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 SLC22A4Q9H015 551 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 TMEM27Q9HBJ8 222 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 C12orf4Q9NQ89 552 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 C8orf4Q9NR00 106 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 DDX19AQ9NUU7 478 aaKnown RBP2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 DNAJC27Q9NZQ0 273 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 TMEM9Q9P0T7 183 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 CD84Q9UIB8 345 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 SIGLEC9Q9Y336 463 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 KMT2EQ8IZD2 1858 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 MYO15AQ9UKN7 3530 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 MYO9BQ13459 2157 aa2.77□□□□□ -1.97
HMGB1P15-201ENST00000453854 COL4A4P53420 1690 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZNF318Q5VUA4 2279 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 MTCL1Q9Y4B5 1905 aaKnown RBP2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 DAPL1A0PJW8 107 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 C2orf74A8MZ97 194 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 KPNA3O00505 521 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 AZIN1O14977 448 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM189A1O60320 539 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 GATBO75879 557 aaKnown RBP2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR8U8P0C7N1 319 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 GKN3PP0CG01 181 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 ERGP11308 486 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 CBR1P16152 277 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 ME2P23368 584 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 PSMA1P25786 263 aaKnown RBP2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 PAX6P26367 422 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 G0S2P27469 103 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 IFNGR2P38484 337 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 VDAC2P45880 294 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 RANP62826 216 aaKnown RBP2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 RPS21P63220 83 aaKnown RBP2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR1Q1Q15612 314 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 HIST3H3Q16695 136 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 GSG1Q2KHT4 349 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 HLA-DRB5Q30154 266 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 HHATQ5VTY9 493 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 SAXO2Q658L1 398 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 LAMTOR1Q6IAA8 161 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 Q6ZR54 194 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 SMIM15Q7Z3B0 74 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 TMED4Q7Z7H5 227 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 OAFQ86UD1 273 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZNF589Q86UQ0 364 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZNF525Q8N782 197 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR2G3Q8NGZ4 309 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 RHOXF1Q8NHV9 184 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 HAVCR2Q8TDQ0 301 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 PYDC1Q8WXC3 89 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 HAUS1Q96CS2 278 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 SMIM12Q96EX1 92 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 GALNT14Q96FL9 552 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 SMARCD1Q96GM5 515 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM19A4Q96LR4 140 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR2M4Q96R27 311 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 PYGO2Q9BRQ0 406 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 CDCA4Q9BXL8 241 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 DEFB126Q9BYW3 111 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 RGS18Q9NS28 235 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM206AQ9NX38 181 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 TAS2R13Q9NYV9 303 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 TAS2R7Q9NYW3 318 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 CLCF1Q9UBD9 225 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZNF629Q9UEG4 869 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 VAX2Q9UIW0 290 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 KLHL21Q9UJP4 597 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms