RNA–Protein interactions for RNA: ENST00000451916.1

CLHC1-208, Transcript of clathrin heavy chain linker domain containing 1, human

TSL 3

Gene CLHC1, Length 616 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLHC1-208	ENST00000451916	SLC25A1	P53007	311 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	ELL	P55199	621 aa	Predicted RBP	4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	MTCP1	P56278	107 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	TPPP2	P59282	170 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	RAE1	P78406	368 aa	Known RBP	4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	PAX2	Q02962	417 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	ZNF85	Q03923	595 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	PPP1R1A	Q13522	171 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	ENDOG	Q14249	297 aa	Known RBP	4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	LY6K	Q17RY6	165 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	DCAF4L1	Q3SXM0	396 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916		Q499Y3	187 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	EIPR1	Q53HC9	387 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	TMEM41B	Q5BJD5	291 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	LRRC10	Q5BKY1	277 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	ACTL10	Q5JWF8	245 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	LDLRAD2	Q5SZI1	272 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	ZNF343	Q6P1L6	599 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	TMEM220	Q6QAJ8	160 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	STAC2	Q6ZMT1	411 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	MBOAT2	Q6ZWT7	520 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	CHST9	Q7L1S5	443 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	GLT6D1	Q7Z4J2	308 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	VASH2	Q86V25	355 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	PRIMA1	Q86XR5	153 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	STPG4	Q8N801	248 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916		Q8NA96	180 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	CYB561A3	Q8NBI2	242 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	POC1A	Q8NBT0	407 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	B3GALNT2	Q8NCR0	500 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	OR51L1	Q8NGJ5	315 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	SLC38A5	Q8WUX1	472 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	PELI1	Q96FA3	418 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	THOC3	Q96J01	351 aa	Known RBP	4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	LMLN	Q96KR4	655 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	OR2V2	Q96R30	315 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	GPA33	Q99795	319 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	AGMAT	Q9BSE5	352 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	NMNAT2	Q9BZQ4	307 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	MAP1LC3B	Q9GZQ8	125 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	CST11	Q9H112	138 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	EGLN3	Q9H6Z9	239 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	SYNPO2L	Q9H987	977 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	TMEM9B	Q9NQ34	198 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	OR2S2	Q9NQN1	319 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	ALKBH4	Q9NXW9	302 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	CLEC5A	Q9NY25	188 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	FLRT3	Q9NZU0	649 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	P2RX2	Q9UBL9	471 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	IL36A	Q9UHA7	158 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	NAT8	Q9UHE5	227 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	RAB22A	Q9UL26	194 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	C14orf166	Q9Y224	244 aa	Known RBP	4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	SLC22A13	Q9Y226	551 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	MRPS18B	Q9Y676	258 aa	Known RBP	4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	ARL5A	Q9Y689	179 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	WSB1	Q9Y6I7	421 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	NLRC5	Q86WI3	1866 aa		4.35	□□□□□ -1.71
CLHC1-208	ENST00000451916	ZNF462	Q96JM2	2506 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	IGSF10	Q6WRI0	2623 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	TENM4	Q6N022	2769 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	IGLV3-10	A0A075B6K4	115 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	TRAV18	A0A075B6X5	111 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	TRBV5-4	A0A0C4DH59	114 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916		A0A1W2PRS3	328 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	TSPAN11	A1L157	253 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	MSGN1	A6NI15	193 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	VSTM2B	A6NLU5	285 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	OR4C45	A6NMZ5	311 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	ZNF727	A8MUV8	499 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	EEF1E1-BLOC1S5	C9J1V9	151 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916		E5RGE8	158 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	IFNL4	K9M1U5	179 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	SLC17A2	O00624	439 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	PIR	O00625	290 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	CCL22	O00626	93 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	PIN1P1	O15428	100 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	NKX2-8	O15522	239 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	FGF17	O60258	216 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	STK17B	O94768	372 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	SFT2D2	O95562	160 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	TBX6	O95947	436 aa	Predicted RBP	4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	MBP	P02686	304 aa	Predicted RBP	4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	MMP7	P09237	267 aa	Predicted RBP	4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	TACSTD2	P09758	323 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	OR4Q2	P0C623	313 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	ZNF705D	P0CH99	300 aa	Predicted RBP	4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	ZNF705B	P0CI00	300 aa	Predicted RBP	4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	TCN2	P20062	427 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	GCSH	P23434	173 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	RPL12	P30050	165 aa	Known RBP	4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	FCGR2C	P31995	323 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	SRP14	P37108	136 aa	Known RBP	4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	CTRL	P40313	264 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	FRK	P42685	505 aa	Predicted RBP	4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	GABRA2	P47869	451 aa		4.34	□□□□□ -1.71
CLHC1-208	ENST00000451916	CSNK1A1	P48729	337 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms