RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TCF23Q7RTU1 214 aa12.96□□□□□ -0.33
SGCE-208ENST00000450385 TRAPPC6BQ86SZ2 158 aa12.96□□□□□ -0.33
SGCE-208ENST00000450385 Q8N2B8 174 aa12.96□□□□□ -0.33
SGCE-208ENST00000450385 DHRSXQ8N5I4 330 aa12.96□□□□□ -0.33
SGCE-208ENST00000450385 OR52N1Q8NH53 320 aa12.96□□□□□ -0.33
SGCE-208ENST00000450385 BARHL1Q9BZE3 327 aa12.96□□□□□ -0.33
SGCE-208ENST00000450385 CHST6Q9GZX3 395 aa12.96□□□□□ -0.33
SGCE-208ENST00000450385 TCF19Q9Y242 345 aa12.96□□□□□ -0.33
SGCE-208ENST00000450385 ODAMA1E959 279 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 ZNF729A6NN14 1252 aaPredicted RBP12.95□□□□□ -0.34
SGCE-208ENST00000450385 E9PI62 339 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 ZNF780AO75290 641 aaPredicted RBP12.95□□□□□ -0.34
SGCE-208ENST00000450385 ZNF44P15621 663 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 CEACAM3P40198 252 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 PRRX1P54821 245 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 KRTAP10-3P60369 221 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 SRSF4Q08170 494 aaKnown RBP12.95□□□□□ -0.34
SGCE-208ENST00000450385 DYNC1I2Q13409 638 aaKnown RBP12.95□□□□□ -0.34
SGCE-208ENST00000450385 FAM189A2Q15884 450 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 SSX2Q16385 188 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 SLC16A12Q6ZSM3 486 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 LHFPL4Q7Z7J7 247 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 LINC00596Q86U02 117 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 OR4D6Q8NGJ1 314 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 RFT1Q96AA3 541 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 SMIM19Q96E16 107 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 TMEM80Q96HE8 168 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 GPER1Q99527 375 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 IFT22Q9H7X7 185 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 TMEM138Q9NPI0 162 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 IL36GQ9NZH8 169 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 CNOT2Q9NZN8 540 aaKnown RBP12.95□□□□□ -0.34
SGCE-208ENST00000450385 DPM3Q9P2X0 92 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 IL36RNQ9UBH0 155 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 ZNF281Q9Y2X9 895 aa12.95□□□□□ -0.34
SGCE-208ENST00000450385 A0A087X0M5 115 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 A0A1B0GX30 115 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 A6NDX4 124 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 FAM90A22PA8MWA6 464 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 OOSP1A8MZH6 123 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 SIRPB1O00241 398 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 SLC33A1O00400 549 aaPredicted RBP12.94□□□□□ -0.34
SGCE-208ENST00000450385 GPX5O75715 221 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 C21orf33P30042 268 aaPredicted RBP12.94□□□□□ -0.34
SGCE-208ENST00000450385 BRS3P32247 399 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 TAS2R43P59537 309 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 PPP3R1P63098 170 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 LY6EQ16553 131 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 NHLRC3Q5JS37 347 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 KRBOX4Q5JUW0 171 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 CDH26Q8IXH8 852 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 ABHD12Q8N2K0 398 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 OR10A7Q8NGE5 316 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 CFHR4Q92496 578 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 THRSPQ92748 146 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 TMEM106AQ96A25 262 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 AKR1E2Q96JD6 320 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 SPACA5Q96QH8 159 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 PRSS22Q9GZN4 317 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 LINC00574Q9H8X3 128 aa12.94□□□□□ -0.34
SGCE-208ENST00000450385 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.94□□□□□ -0.34
SGCE-208ENST00000450385 EFCAB10A6NFE3 127 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 LEUTXA8MZ59 168 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 IGLV1-47P01700 117 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 CD1AP06126 327 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 CDK2P24941 298 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 PTGFRP43088 359 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 ETV1P50549 477 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 ADARB1P78563 741 aaKnown RBP12.93□□□□□ -0.34
SGCE-208ENST00000450385 AESQ08117 197 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 GPR176Q14439 515 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 RSU1Q15404 277 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 SMN1Q16637 294 aaKnown RBP12.93□□□□□ -0.34
SGCE-208ENST00000450385 YIF1BQ5BJH7 314 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 CCDC144NLQ6NUI1 221 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 OR5D18Q8NGL1 313 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 NDNFQ8TB73 568 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 PLCXD1Q9NUJ7 323 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 CKLFQ9UBR5 152 aa12.93□□□□□ -0.34
SGCE-208ENST00000450385 KBTBD11-OT1A0A1B0GTJ5 212 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 MEGF11A6BM72 1044 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 F2RL2O00254 374 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 GLIPR1P48060 266 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 GTF2A1P52655 376 aaPredicted RBP12.92□□□□□ -0.34
SGCE-208ENST00000450385 SCN1BQ07699 218 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 DMKNQ6E0U4 476 aaPredicted RBP12.92□□□□□ -0.34
SGCE-208ENST00000450385 SATL1Q86VE3 508 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 DYNAPQ8N1N2 210 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 TPRX1Q8N7U7 411 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 OR4P4Q8NGL7 312 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 CNIH3Q8TBE1 160 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 CYGBQ8WWM9 190 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 MRPS24Q96EL2 167 aaKnown RBP12.92□□□□□ -0.34
SGCE-208ENST00000450385 S100A13Q99584 98 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 METTL9Q9H1A3 318 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 VCXQ9H320 206 aa12.92□□□□□ -0.34
SGCE-208ENST00000450385 H0YJX3 145 aa12.91□□□□□ -0.34
SGCE-208ENST00000450385 TOR1AO14656 332 aa12.91□□□□□ -0.34
SGCE-208ENST00000450385 CASQ2O14958 399 aaPredicted RBP12.91□□□□□ -0.34
SGCE-208ENST00000450385 CSTBP04080 98 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms