RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 POM121CA8CG34 1229 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 SRRM5B3KS81 715 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 C3orf80F5H4A9 247 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 SLC33A1O00400 549 aaPredicted RBP8.16□□□□□ -1.1
RFC4-210ENST00000449502 ARPC1BO15143 372 aaKnown RBP8.16□□□□□ -1.1
RFC4-210ENST00000449502 SIAH2O43255 324 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 PRAF2O60831 178 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 NDUFB6O95139 128 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 GOSR1O95249 250 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 CYB5R3P00387 301 aaPredicted RBP8.16□□□□□ -1.1
RFC4-210ENST00000449502 CTXN2P0C2S0 81 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 EGR1P18146 543 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 CD80P33681 288 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 BTCP35070 178 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 ECI1P42126 302 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 BCAP31P51572 246 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 COL10A1Q03692 680 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 DAZAP2Q15038 168 aaPredicted RBP8.16□□□□□ -1.1
RFC4-210ENST00000449502 GRK1Q15835 563 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 KCNJ8Q15842 424 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 SHEQ5VZ18 495 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 MOB1BQ7L9L4 216 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 ARRDC1Q8N5I2 433 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 OR5AP2Q8NGF4 316 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 OR5T2Q8NGG2 359 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 OR4D10Q8NGI6 311 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 CCDC107Q8WV48 283 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 CCL17Q92583 94 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 UPRTQ96BW1 309 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 MARVELD1Q9BSK0 173 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 PIEZO2Q9H5I5 2752 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 TREM2Q9NZC2 230 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 KCNIP1Q9NZI2 227 aa8.16□□□□□ -1.1
RFC4-210ENST00000449502 KLF2Q9Y5W3 355 aaPredicted RBP8.16□□□□□ -1.1
RFC4-210ENST00000449502 SPTA1P02549 2419 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 PPIAL4EA0A075B759 164 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 TRAV38-1A0A0B4J264 116 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 FUOMA2VDF0 154 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 OOEPA6NGQ2 149 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 A6NNC1 897 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 TRDCB7Z8K6 153 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 PPIAL4DF5H284 164 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 C19orf84I3L1E1 186 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 PEX14O75381 377 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 C1QL1O75973 258 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 PPIAL4FP0DN26 164 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 OR5H8P0DN80 308 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 PSG2P11465 335 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 PGAM2P15259 253 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 MUC1P15941 1255 aaPredicted RBP8.15□□□□□ -1.1
RFC4-210ENST00000449502 CEBPDP49716 269 aaPredicted RBP8.15□□□□□ -1.1
RFC4-210ENST00000449502 PPOXP50336 477 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 RAG2P55895 527 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 SRSF7Q16629 238 aaKnown RBP eCLIP8.15□□□□□ -1.12e-6■■■■□ 21.1
RFC4-210ENST00000449502 TATDN3Q17R31 274 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 MST1LQ2TV78 715 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 HFEQ30201 348 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 TMED4Q7Z7H5 227 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 PEG10Q86TG7 708 aaKnown RBP8.15□□□□□ -1.1
RFC4-210ENST00000449502 ZCCHC24Q8N2G6 241 aaKnown RBP8.15□□□□□ -1.1
RFC4-210ENST00000449502 GCSAMQ8N6F7 178 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 DEFB108BQ8NET1 73 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 OR6F1Q8NGZ6 308 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 SNAPC3Q92966 411 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 SLC6A7Q99884 636 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 UBTD1Q9HAC8 227 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 SEBOXQ9HB31 216 aaPredicted RBP8.15□□□□□ -1.1
RFC4-210ENST00000449502 TMEM165Q9HC07 324 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 Q9N2K0 584 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 MYOZ1Q9NP98 299 aaPredicted RBP8.15□□□□□ -1.1
RFC4-210ENST00000449502 TMEM106BQ9NUM4 274 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 SLC2A8Q9NY64 477 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 PPIAL4AQ9Y536 164 aa8.15□□□□□ -1.1
RFC4-210ENST00000449502 LAMA5O15230 3695 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 CHD8Q9HCK8 2581 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 MEIKINA0A087WXM9 373 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 IGHV1-69-2A0A0G2JMI3 117 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 FAM172BPA6NC97 362 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 LGALS8O00214 317 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 SDCBPO00560 298 aaPredicted RBP8.14□□□□□ -1.11
RFC4-210ENST00000449502 FABP7O15540 132 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 DIRAS3O95661 229 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 LHBP01229 141 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 TK1P04183 234 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 LMO1P25800 156 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 LOXP28300 417 aaPredicted RBP8.14□□□□□ -1.11
RFC4-210ENST00000449502 HERV-K104P61576 105 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 SEC61A1P61619 476 aaKnown RBP8.14□□□□□ -1.11
RFC4-210ENST00000449502 ATXN7L3Q14CW9 347 aaPredicted RBP8.14□□□□□ -1.11
RFC4-210ENST00000449502 SWI5Q1ZZU3 235 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 SPRNQ5BIV9 151 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 KRBOX4Q5JUW0 171 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 C6orf183Q5T699 404 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 METTL11BQ5VVY1 283 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 SLC35E4Q6ICL7 350 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 C11orf88Q6PI97 169 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 ZNF561Q8N587 486 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 ZDHHC22Q8N966 263 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 OR5D13Q8NGL4 314 aa8.14□□□□□ -1.11
RFC4-210ENST00000449502 LILRB1Q8NHL6 650 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms