RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 KIR2DS4P43632 304 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 ZNF83P51522 516 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 FGL1Q08830 312 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 KLRB1Q12918 225 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 ZNF154Q13106 437 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 PPP1R1AQ13522 171 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 KIR2DS1Q14954 304 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 SPIN3Q5JUX0 258 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 AADACL3Q5VUY0 350 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 SLC22A25Q6T423 547 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 DHRS11Q6UWP2 260 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 NEK7Q8TDX7 302 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 ZNF2Q9BSG1 426 aaPredicted RBP8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 TMPRSS13Q9BYE2 586 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 CHIAQ9BZP6 476 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 CA10Q9NS85 328 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 DECR2Q9NUI1 292 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 ASF1BQ9NVP2 202 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 SHPKQ9UHJ6 478 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 HSPB11Q9Y547 144 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 ACACBO00763 2458 aa8.99□□□□□ -0.97
VIPAS39-203ENST00000448935 AKAP13Q12802 2813 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 A0A0G2JNJ9 132 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 F8VVB4 439 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 F8VWA3 439 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 C16orf97H3BN30 126 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 DEGS1O15121 323 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 SFT2D2O95562 160 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 NAPSAO96009 420 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 CTSDP07339 412 aaPredicted RBP8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 CTXN2P0C2S0 81 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 PGA5P0DJD9 388 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 GLRXP35754 106 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 FABP6P51161 128 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 SELENOVP59797 346 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 ERVK11-1P61568 191 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 NDUFA5Q16718 116 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 C17orf107Q6ZR85 190 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 C9orf62Q8N4C0 152 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 POC1AQ8NBT0 407 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 OR5M8Q8NGP6 311 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 COQ8AQ8NI60 647 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 GRPEL2Q8TAA5 225 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 CLUHP3Q96NS8 147 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 NRIP2Q9BQI9 281 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 C5orf66Q9H5L9 145 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 TREM2Q9NZC2 230 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 PIPOXQ9P0Z9 390 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 Q9UFV3 132 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 OPN4Q9UHM6 478 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 SPTBN2O15020 2390 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 APC2O95996 2303 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 ACACAQ13085 2346 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 ESPL1Q14674 2120 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 IGKV1D-8A0A087WSZ0 117 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 TRBV6-6A0A0A6YYG2 114 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 A0A1B0GWJ7 208 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 OR5H14A6NHG9 310 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 SH2D1BO14796 132 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 RHBDL1O75783 438 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 NXPH2O95156 264 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 GRPP07492 148 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 ZNF44P15621 663 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 ZNF250P15622 560 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 PPP3CBP16298 524 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 SEC61A1P61619 476 aaKnown RBP8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 IFITM2Q01629 132 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 SRSF4Q08170 494 aaKnown RBP8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 DAZAP2Q15038 168 aaPredicted RBP8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 ZNF146Q15072 292 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 PDCD1Q15116 288 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 ALKBH6Q3KRA9 238 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 SHEQ5VZ18 495 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 BATF2Q8N1L9 274 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 SUMF2Q8NBJ7 301 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 ADAD2Q8NCV1 583 aaKnown RBP8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 RND1Q92730 232 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 VKORC1Q9BQB6 163 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 TLNRD1Q9H1K6 362 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 FN3KRPQ9HA64 309 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 Q9N2K0 584 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 PLSCR3Q9NRY6 295 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 COMMD9Q9P000 198 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 ZNF581Q9P0T4 197 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 TINAGQ9UJW2 476 aa8.98□□□□□ -0.97
VIPAS39-203ENST00000448935 CDIPTO14735 213 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 MLNRO43193 412 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 DIRAS3O95661 229 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 IGHV3-13P01766 116 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 SFTPCP11686 197 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 UCP3P55916 312 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 H2BFSP57053 126 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 KLF3P57682 345 aaPredicted RBP8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 HERV-K104P61576 105 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 CYCSP99999 105 aaKnown RBP8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 FAM27E3Q08E93 113 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 ZNF660Q6AZW8 331 aaPredicted RBP8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 LAMTOR1Q6IAA8 161 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 TMEM108Q6UXF1 575 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 MOB1BQ7L9L4 216 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms