RNA–Protein interactions for RNA: ENST00000448926.5

LMBR1-212, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 3,629 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-212ENST00000448926 SCAND1P57086 179 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 UBE2NP61088 152 aaKnown RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 PCBD1P61457 104 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 MALLQ13021 153 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 RBM39Q14498 530 aaKnown RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 OXLD1Q5BKU9 147 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 SPINK9Q5DT21 86 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 UTF1Q5T230 341 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 RPL7L1Q6DKI1 246 aaKnown RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 THAP6Q8TBB0 222 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 LRRC20Q8TCA0 184 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 RTN4IP1Q8WWV3 396 aaPredicted RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 PTX4Q96A99 478 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 KIRREL1Q96J84 757 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 LOXL4Q96JB6 756 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 BCL2L14Q9BZR8 327 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 FAM234AQ9H0X4 552 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.56□□□□□ -1.849e-7■■■■■ 29.4
LMBR1-212ENST00000448926 CCL28Q9NRJ3 127 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DNAJB11Q9UBS4 358 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 C14orf166Q9Y224 244 aaKnown RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 IGKV3D-15A0A087WSY6 115 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 KANTRA0A1W2PQU2 76 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 KIAA1324LA8MWY0 1029 aaPredicted RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 TRAPPC2LH3BP13 241 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 BMP5P22003 454 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 FUT6P51993 359 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 ERVFRD-1P60508 538 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 EIF3IQ13347 325 aaKnown RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 BTN1A1Q13410 526 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 OR8B8Q15620 311 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 TMEM128Q5BJH2 165 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 NHLRC3Q5JS37 347 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 FAM209AQ5JX71 171 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 RIPPLY2Q5TAB7 128 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 GGNBP1Q5YKI7 109 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 TFAP2EQ6VUC0 442 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 LHFPL2Q6ZUX7 228 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 SLC38A6Q8IZM9 456 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 FGFRL1Q8N441 504 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 ZNF808Q8N4W9 903 aaPredicted RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 SUMF2Q8NBJ7 301 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 TMEM178AQ8NBL3 297 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 OR1S2Q8NGQ3 325 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 BCL2L2Q92843 193 aaPredicted RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 ERGIC1Q969X5 290 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 OCSTAMPQ9BR26 566 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 SUCNR1Q9BXA5 334 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DCAF16Q9NXF7 216 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 PPP1R3CQ9UQK1 317 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 KCNMB2Q9Y691 235 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 TNCP24821 2201 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 A0A1B0GW55 424 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 LRP3O75074 770 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 PDCD6O75340 191 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DUS4LO95620 317 aaKnown RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 APOC3P02656 99 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 CYC1P08574 325 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DUX4L2P0CJ85 424 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DUX4L3P0CJ86 424 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DUX4L4P0CJ87 422 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DUX4L5P0CJ88 424 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DUX4L6P0CJ89 424 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DUX4L7P0CJ90 424 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 PRKACBP22694 351 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 PSMB6P28072 239 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 KIR2DL2P43627 348 aaPredicted RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 MECP2P51608 486 aaKnown RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 PSG7Q13046 419 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 EDDM3AQ14507 147 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 CLINT1Q14677 625 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 TUSC1Q2TAM9 212 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 PLEKHN1Q494U1 663 aaPredicted RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 ESCO2Q56NI9 601 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 PXDC1Q5TGL8 231 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 TMEM42Q69YG0 159 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 TMEM65Q6PI78 240 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DUX4L9Q6RFH8 374 aaPredicted RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 FBXW12Q6X9E4 464 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 ZNF818PQ6ZRF7 136 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 SEM1Q6ZVN7 128 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 GAPTQ8N292 157 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DEFB108BQ8NET1 73 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 TMEM185AQ8NFB2 350 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 OR10V1Q8NGI7 309 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 PLPPR1Q8TBJ4 325 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 LEAP2Q969E1 77 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 APOBEC3DQ96AK3 386 aaPredicted RBP3.56□□□□□ -1.84
LMBR1-212ENST00000448926 MED30Q96HR3 178 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 HIST1H2AAQ96QV6 131 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 BCO1Q9HAY6 547 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 CDH20Q9HBT6 801 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 SLC2A9Q9NRM0 540 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DUX4Q9UBX2 424 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 TNFSF18Q9UNG2 199 aa3.56□□□□□ -1.84
LMBR1-212ENST00000448926 DSCAMO60469 2012 aa3.55□□□□□ -1.84
LMBR1-212ENST00000448926 ANKHD1Q8IWZ3 2542 aaKnown RBP3.55□□□□□ -1.84
LMBR1-212ENST00000448926 TRAV24A0A0B4J272 114 aa3.55□□□□□ -1.84
LMBR1-212ENST00000448926 A0A1W2PPE3 182 aa3.55□□□□□ -1.84
LMBR1-212ENST00000448926 PQLC2LA1A4F0 135 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms