RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 IFNA5P01569 189 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 CEACAM8P31997 349 aaPredicted RBP8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 RAC1P63000 192 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 KISS1Q15726 138 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 CYP2G1PQ6ZSU1 146 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 RD3Q7Z3Z2 195 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 SFTPA1Q8IWL2 248 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 FLVCR1-AS1Q8TAF5 88 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 ADAMTS18Q8TE60 1221 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 RPUSD4Q96CM3 377 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 POLR1DQ9Y2S0 133 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 MYO7BQ6PIF6 2116 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 SPAG17Q6Q759 2223 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 PHF3Q92576 2039 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 NKX6-3A6NJ46 265 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 NPIPA5E9PKD4 350 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 IFNA1P01562 189 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 GP1BBP13224 206 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 SLC6A8P48029 635 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 KLF3P57682 345 aaPredicted RBP8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 CXorf66Q5JRM2 361 aaPredicted RBP8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 C11orf40Q8WZ69 217 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 CIB3Q96Q77 187 aaPredicted RBP8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 C11orf1Q9H5F2 150 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 TMEM106BQ9NUM4 274 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 NPIPA1Q9UND3 350 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 PPIAL4AQ9Y536 164 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 LAMA3Q16787 3333 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 FOXI3A8MTJ6 420 aaPredicted RBP8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 TRAPPC6AO75865 159 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 WISP1O95388 367 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 RPL23P62829 140 aaKnown RBP8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 TMEM41BQ5BJD5 291 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 DEFB128Q7Z7B8 93 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 PRR22Q8IZ63 422 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 TECTBQ96PL2 329 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 ATP5SQ99766 215 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 SLC17A4Q9Y2C5 497 aa8.19□□□□□ -1.1
SYNPO2-204ENST00000448416 NUPR1O60356 82 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 NXPH3O95157 252 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 MRGPRGQ86SM5 289 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 CCDC71LQ8N9Z2 235 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 IMMP2LQ96T52 175 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 SPIN2AQ99865 258 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 SPIN2BQ9BPZ2 258 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 PRTFDC1Q9NRG1 225 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 IGKV1-9A0A0C4DH69 117 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 PRR19A6NJB7 356 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 LRRC3CA6NJW4 275 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 SHISA7A6NL88 538 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 NXPH2O95156 264 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 BAXQ07812 192 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 MMDQ15546 238 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 RIPPLY2Q5TAB7 128 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 OR8B12Q8NGG6 310 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 RBKSQ9H477 322 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 AURKAIP1Q9NWT8 199 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 TRAPPC1Q9Y5R8 145 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 SHANK1Q9Y566 2161 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 TMED7-TICAM2A0A0A6YYA0 188 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 DRD3P35462 400 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 TLE1Q04724 770 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 TEX43Q6ZNM6 134 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 ZNF695Q8IW36 515 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 OR2V1Q8NHB1 315 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 VN1R17PQ8TDU5 208 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 ZPBPQ9BS86 351 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 RTN4RQ9BZR6 473 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 TMEM9BQ9NQ34 198 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 DEC1Q9P2X7 70 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 UBE2J1Q9Y385 318 aaPredicted RBP8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 RTTNQ86VV8 2226 aa8.18□□□□□ -1.1
SYNPO2-204ENST00000448416 IGHMP01871 453 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 TDGF1P13385 188 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 C9orf50Q5SZB4 431 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 KCNIP4Q6PIL6 250 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 AGBL5Q8NDL9 886 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 OR1L6Q8NGR2 347 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 CMTM2Q8TAZ6 248 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 SCGB1C1Q8TD33 95 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 RSG1Q9BU20 258 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 FGF22Q9HCT0 170 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 MED29Q9NX70 200 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 LILRA1O75019 489 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 KBTBD11O94819 623 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 IL33O95760 270 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 ZNF121P58317 390 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 KCNMB1Q16558 191 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 DEFB110Q30KQ9 67 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 ALKBH3Q96Q83 286 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 TUBG2Q9NRH3 451 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 RNF150Q9ULK6 438 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 COL4A6Q14031 1691 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 CBY3A6NI87 242 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 A8MXE2 369 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 ZNF737O75373 536 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 PDGFBP01127 241 aaPredicted RBP8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 OR5G3P0C626 314 aa8.17□□□□□ -1.1
SYNPO2-204ENST00000448416 FCGR2AP12318 317 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms