RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ACVR1Q04771 509 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 TM4SF20Q53R12 229 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 C2orf83Q53S99 150 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 LINC00052Q96N35 136 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 TINAGL1Q9GZM7 467 aaPredicted RBP8□□□□□ -1.13
NIPBL-202ENST00000448238 CMC2Q9NRP2 79 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 CYSLTR1Q9Y271 337 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 C7orf72A4D263 438 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 H0YGG7 62 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 YIPF6Q96EC8 236 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 DDA1Q9BW61 102 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 DLC1Q96QB1 1528 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 PI3P19957 117 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 FCARP24071 287 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 ASB16Q96NS5 453 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 LYRM4Q9HD34 91 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 FOXJ2Q9P0K8 574 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 C19orf53Q9UNZ5 99 aaPredicted RBP8□□□□□ -1.13
NIPBL-202ENST00000448238 TLCD2A6NGC4 264 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 J3KTA2 159 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 TAPBPO15533 448 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF688P0C7X2 276 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 GALP22466 123 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 TSPOP30536 169 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 ASIPP42127 132 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 MPV17LQ2QL34 196 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 OLIG3Q7RTU3 272 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 LILRA2Q8N149 483 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 C12orf42Q96LP6 360 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 Q96M85 177 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 TOX2Q96NM4 488 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 SLC25A2Q9BXI2 301 aa8□□□□□ -1.13
NIPBL-202ENST00000448238 TMEM215Q68D42 235 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 OR51M1Q9H341 326 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF541Q9H0D2 1346 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 MYO3AQ8NEV4 1616 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 FCGR3BO75015 233 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 NDUFB6O95139 128 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 MPC2O95563 127 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 FAHD1Q6P587 224 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 WFDC8Q8IUA0 241 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 SSC4DQ8WTU2 575 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 PDLIM5Q96HC4 596 aaKnown RBP7.99□□□□□ -1.13
NIPBL-202ENST00000448238 METTL1Q9UBP6 276 aaKnown RBP7.99□□□□□ -1.13
NIPBL-202ENST00000448238 SKP2Q13309 424 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 FAM209BQ5JX69 171 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 NR2C2APQ86WQ0 139 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 OR6X1Q8NH79 312 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 TMUB1Q9BVT8 246 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 ADAMTS5Q9UNA0 930 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 C3orf85A0A1B0GTC6 90 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 TMEM272A0A1B0GTI8 110 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 TMEM189A5PLL7 270 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 TMEM189-UBE2V1I3L0A0 370 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 RIPPLY2Q5TAB7 128 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 LINC00696Q6ZRV3 163 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 HDHD3Q9BSH5 251 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-202ENST00000448238 C7orf66A4D0T2 115 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 F2RL2O00254 374 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 ADAP1O75689 374 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 MEF2BQ02080 365 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-202ENST00000448238 RABAC1Q9UI14 185 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 FECHP22830 423 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 CXCL12P48061 93 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 CCL11P51671 97 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 HMGA2P52926 109 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 SPNS2Q8IVW8 549 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 PBOV1Q9GZY1 135 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 ARG1P05089 322 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 FURINP09958 794 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 P2RY1P47900 373 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 PTRH1Q86Y79 214 aaKnown RBP7.99□□□□□ -1.13
NIPBL-202ENST00000448238 LPAR2Q9HBW0 351 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 PRNDQ9UKY0 176 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 ZMIZ1Q9ULJ6 1067 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 PPIL1Q9Y3C6 166 aa7.99□□□□□ -1.13
NIPBL-202ENST00000448238 PLXNB1O43157 2135 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 SEMG1P04279 462 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 TEPPQ6URK8 271 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 OR10D3Q8NH80 312 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 TAAR2Q9P1P5 351 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 SLC25A15Q9Y619 301 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 CXorf65A6NEN9 183 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 DYNLT3P51808 116 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 LAMTOR1Q6IAA8 161 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 TTC9CQ8N5M4 171 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 IGSF8Q969P0 613 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 DIRC2Q96SL1 478 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 ATP5LO75964 103 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 PCBP3P57721 371 aaKnown RBP7.98□□□□□ -1.13
NIPBL-202ENST00000448238 DHRS2Q13268 280 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 PMVKQ15126 192 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 TXNRD3NBQ6F5E7 133 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF880Q6PDB4 577 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 TMEM255BQ8WV15 326 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 METTL26Q96S19 204 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 PYCARD-AS1I3L0S3 204 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 FGF8P55075 233 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-202ENST00000448238 TMPRSS3P57727 454 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 TMEM255AQ5JRV8 349 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms