RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 DCKP27707 260 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 HERPUD1Q15011 391 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 KRBOX4Q5JUW0 171 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 MINOS1Q5TGZ0 78 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 OR2G6Q5TZ20 316 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 Q6P435 159 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 RPL22L1Q6P5R6 122 aaKnown RBP14.28□□□□□ -0.12
DDX56-207ENST00000448192 C11orf88Q6PI97 169 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 CCBE1Q6UXH8 406 aaPredicted RBP14.28□□□□□ -0.12
DDX56-207ENST00000448192 KLHDC1Q8N7A1 406 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 C11orf44Q8N8P7 122 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 CHST4Q8NCG5 386 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 OR51A2Q8NGJ7 313 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 FAM110DQ8TAY7 271 aaPredicted RBP14.28□□□□□ -0.12
DDX56-207ENST00000448192 GPR148Q8TDV2 347 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 RGP1Q92546 391 aaPredicted RBP14.28□□□□□ -0.12
DDX56-207ENST00000448192 CPNE2Q96FN4 548 aaPredicted RBP14.28□□□□□ -0.12
DDX56-207ENST00000448192 FAM192AQ9GZU8 254 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 TAS2R4Q9NYW5 299 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 PITPNC1Q9UKF7 332 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 MINOS1-NBL1R4GNA1 71 aa14.28□□□□□ -0.12
DDX56-207ENST00000448192 IRGMA1A4Y4 181 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 ODAMA1E959 279 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 MEGF11A6BM72 1044 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 FAM172BPA6NC97 362 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 A6NDX4 124 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 F2RL2O00254 374 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 CD2P06729 351 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 VSIG10L2P0DP72 767 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 HTR1DP28221 377 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 MTNR1BP49286 362 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 ATXN7L3Q14CW9 347 aaPredicted RBP14.27□□□□□ -0.13
DDX56-207ENST00000448192 CDK5R1Q15078 307 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 C2orf68Q2NKX9 166 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 CCDC58Q4VC31 144 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 TTC23Q5W5X9 447 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 HIST2H2BDQ6DRA6 164 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 OR52W1Q6IF63 320 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 BAIAP2L2Q6UXY1 529 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 ABHD12Q8N2K0 398 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 DTX3Q8N9I9 347 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 TNFAIP8L1Q8WVP5 186 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 CORO2AQ92828 525 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 COQ2Q96H96 371 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 CDCA4Q9BXL8 241 aa14.27□□□□□ -0.13
DDX56-207ENST00000448192 H0YJX3 145 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 GABRPO00591 440 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 HSPB6O14558 160 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 CSN2P05814 226 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 CSF1P09603 554 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 MYL12AP19105 171 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 PTGFRP43088 359 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 HABP2Q14520 560 aaPredicted RBP14.26□□□□□ -0.13
DDX56-207ENST00000448192 RSU1Q15404 277 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 ZNF529Q6P280 563 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 HEPN1Q6WQI6 88 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 PXT1Q8NFP0 134 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 TMEM106AQ96A25 262 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 PPIL3Q9H2H8 161 aaKnown RBP14.26□□□□□ -0.13
DDX56-207ENST00000448192 ZNF702PQ9H963 129 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 TAS2R3Q9NYW6 316 aa14.26□□□□□ -0.13
DDX56-207ENST00000448192 EXOSC1Q9Y3B2 195 aaKnown RBP14.26□□□□□ -0.13
DDX56-207ENST00000448192 SIRT4Q9Y6E7 314 aaPredicted RBP14.26□□□□□ -0.13
DDX56-207ENST00000448192 GDNFP39905 211 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 DYNLT3P51808 116 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 RCN1Q15293 331 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 PAN3Q58A45 887 aaKnown RBP14.25□□□□□ -0.13
DDX56-207ENST00000448192 ELP2Q6IA86 826 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 RTN4RL2Q86UN3 420 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 DHRSXQ8N5I4 330 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 SETD9Q8NE22 299 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 OR4D6Q8NGJ1 314 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 OR4P4Q8NGL7 312 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 OR10K1Q8NGX5 313 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 TMEM80Q96HE8 168 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 CHCHD3Q9NX63 227 aaKnown RBP14.25□□□□□ -0.13
DDX56-207ENST00000448192 BABAM2Q9NXR7 383 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 CLEC2DQ9UHP7 191 aa14.25□□□□□ -0.13
DDX56-207ENST00000448192 DIMT1Q9UNQ2 313 aaKnown RBP14.25□□□□□ -0.13
DDX56-207ENST00000448192 TOR1AO14656 332 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 OGG1O15527 345 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 HTR3BO95264 441 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 PPP3R1P63098 170 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 ADARB1P78563 741 aaKnown RBP14.24□□□□□ -0.13
DDX56-207ENST00000448192 MED21Q13503 144 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 ARSJQ5FYB0 599 aaPredicted RBP14.24□□□□□ -0.13
DDX56-207ENST00000448192 PACRGLQ8N7B6 248 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 ZNF596Q8TC21 504 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 PRSS22Q9GZN4 317 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 ZNF286AQ9HBT8 521 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 C8orf4Q9NR00 106 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 OR6C3Q9NZP0 311 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 DPM3Q9P2X0 92 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 ING4Q9UNL4 249 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 ZNF281Q9Y2X9 895 aa14.24□□□□□ -0.13
DDX56-207ENST00000448192 TRAV24A0A0B4J272 114 aa14.23□□□□□ -0.13
DDX56-207ENST00000448192 ZNF729A6NN14 1252 aaPredicted RBP14.23□□□□□ -0.13
DDX56-207ENST00000448192 H3BUI4 141 aa14.23□□□□□ -0.13
DDX56-207ENST00000448192 CDRT1O95170 752 aa14.23□□□□□ -0.13
DDX56-207ENST00000448192 LALBAP00709 142 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms